Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0010
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    28   0.064
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.45 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    25   0.79 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.3  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 28.3 bits (60), Expect = 0.064
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +2

Query: 314 IQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSL 484
           +  +H T + +N+N      +  NK    S+ E+RR+ + +A ++ RDA +   D +
Sbjct: 108 LAQVHGTNNGTNKNMRRLSTTTQNKNDDPSYWEKRRK-NNEAAKRSRDARRAKEDEI 163


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -2

Query: 388 LVVTTVIFILCVLI 347
           L++T VIF++CVL+
Sbjct: 253 LIITQVIFVICVLV 266


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 532 VCSQTHHSLTSRHKVLE*IIAFLNCISSFLLCLCVS 425
           V S T   L + HK+L  ++  +N I +F + +C S
Sbjct: 128 VTSTTIKKLFNLHKILVKVVREINGIFAFQVLMCTS 163


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 419 REAHTQAEQKRRDAIKKGYDSLQDLVPTCQR 511
           RE   +AE+ RRD +      L  LVP   R
Sbjct: 30  REMRNRAEKMRRDKLNSYIGELATLVPMVAR 60


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 388 LVVTTVIFILCVLI 347
           L++T  IFI+CV++
Sbjct: 609 LLITQTIFIICVIV 622


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 135 LSYIYNVINVFFIPYIEIMEQGTMNSEK*KIALM*CFI 248
           L+ IY  I   F PY    +QG  NS +  ++L  CF+
Sbjct: 106 LNGIYEYIMRNF-PYYRENKQGWQNSIRHNLSLNKCFV 142


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 320 NIHQTPSSSNQNTEDEDDSGDNKASAL 400
           N + TPS++N NT   ++S  N AS++
Sbjct: 127 NNNNTPSATNNNTNFNNNS--NGASSV 151


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 320 NIHQTPSSSNQNTEDEDDSGDNKASAL 400
           N + TPS++N NT   ++S  N AS++
Sbjct: 75  NNNNTPSATNNNTNFNNNS--NGASSV 99


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 320 NIHQTPSSSNQNTEDEDDSGDNKASAL 400
           N + TPS++N NT   ++S  N AS++
Sbjct: 258 NNNNTPSATNNNTNFNNNS--NGASSV 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,864
Number of Sequences: 336
Number of extensions: 3279
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)