Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0003
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 105 SAQMWENETKPLDVASR 155
           S Q+W   T P+ +ASR
Sbjct: 88  STQLWPQPTGPVTLASR 104


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 186 KIFSVDFLKDPEKLRPVALFRFP 118
           K F V  + DP K +   +FR P
Sbjct: 355 KAFQVKRVPDPSKRKGSYIFRLP 377


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +1

Query: 73   WWFINCLISVKVHKCGKTKQSHWT*LL 153
            W++   LI  +VH   + +++ W  L+
Sbjct: 1174 WFYDGPLIRGEVHYLNRNEETFWNELI 1200


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +1

Query: 73   WWFINCLISVKVHKCGKTKQSHWT*LL 153
            W++   LI  +VH   + +++ W  L+
Sbjct: 1174 WFYDGPLIRGEVHYLNRNEETFWNELI 1200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,023
Number of Sequences: 336
Number of extensions: 2039
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)