Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0004
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.66 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   4.6  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   6.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.1  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/47 (21%), Positives = 20/47 (42%)
 Frame = -1

Query: 504 RLQLEYAIIHLNKYFFIVKRMSVNYIFKHYTVLRHFIRFFFNTYKIS 364
           R+ L    + +  Y      +  N  +K+Y +L H    FF  + ++
Sbjct: 133 RIHLFVRYVFVTSYLLFDYFVQRNQEYKYYQILSHLSGIFFTVFNVA 179


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 426 FKHYTVLRHFIRFFFNTYKI 367
           F +Y  L H++R FF  + +
Sbjct: 516 FNNYQSLAHYLRVFFTVFNV 535


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/47 (21%), Positives = 24/47 (51%)
 Frame = +2

Query: 536 PNYFTLIPDSDGVLYVKQFLILLKFARSIIDYNIFKNVHFNVRYIQE 676
           PN+      +  VLY+  + +L++   S ++ ++  + H N   ++E
Sbjct: 165 PNFVNEYVQAIEVLYICSYTVLIRNKISNLNTSLIHSTHLNGDIVKE 211


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 612 ANFNKIKN-CLTYKTPSLSGINVK*LGLL*YCCNYVYRLQLEYAIIHLNKYFF 457
           ANFNKI    L +    +    +  LG L Y     +  +  +AIIHL+ + +
Sbjct: 168 ANFNKIFGWSLIFLFGRIVLQLLSSLGFLLYASKKQFTFEETFAIIHLSVFVY 220


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 141 YLEYKILENFYMYISVHY 88
           YLE  I E+  +Y SVH+
Sbjct: 64  YLERAIKESLRLYPSVHF 81


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 504 RLQLEYAIIHLNKYFFIVKRMSVNYIFKHY 415
           R  L Y   ++N Y F +     N +F H+
Sbjct: 33  RPMLPYPQNYINSYLFSLSLAQNNQLFTHH 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,105
Number of Sequences: 336
Number of extensions: 3789
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)