Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0066
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   7.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.0  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 128 RCNMKSLYNLYSNICTYIPII 190
           +CN   +Y+L  NIC Y  ++
Sbjct: 474 KCNHGLVYDLELNICNYPQVV 494


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 249 LGTYPPSVVCLFILYPYC 196
           +G    S  CLF+L+ +C
Sbjct: 283 IGLLVDSTYCLFLLFVFC 300


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 249 LGTYPPSVVCLFILYPYC 196
           +G    S  CLF+L+ +C
Sbjct: 283 IGLLVDSTYCLFLLFVFC 300


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 249 LGTYPPSVVCLFILYPYC 196
           +G    S  CLF+L+ +C
Sbjct: 283 IGLLVDSTYCLFLLFVFC 300


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 78  FICPEFRVI 52
           FICPEFR +
Sbjct: 279 FICPEFRYL 287


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 238 IGT*CSFTILLKQFK 282
           +GT C+F I++ QF+
Sbjct: 337 LGTACTFLIIIVQFR 351


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 226 CLLVYSLSILFIYYGYV 176
           C+L+  L I + YY ++
Sbjct: 230 CVLIILLCIYYFYYAFI 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,181
Number of Sequences: 336
Number of extensions: 3574
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)