Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0084
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.3  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.4  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   8.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   8.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   8.4  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 449 QVWLFSEIIIKLSNSYYCKHPTENIIGHHQKD 354
           +V L  E+II + N       T +  GHHQK+
Sbjct: 111 EVCLGDEVIIDVVNHLSSDSTTIHWHGHHQKN 142


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 438 IFRNYNQIIQFLLLQTSYGEHHWTP 364
           IFR +N I+ FL++   +  ++  P
Sbjct: 307 IFRMFNAIVTFLIVMVQFETNYSQP 331


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 438 IFRNYNQIIQFLLLQTSYGEHHWTP 364
           IFR +N I+ FL++   +  ++  P
Sbjct: 627 IFRMFNAIVTFLIVMVQFETNYSQP 651


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 423  NQIIQFLLLQTSYGEHHWTPPKGHVDP 343
            +Q + ++ + T     HW    GHV P
Sbjct: 2502 SQYLDWIAVMTYDFHGHWDKQTGHVAP 2528


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = -1

Query: 268 LQRHNKTLNYEVNGEP------KTVVYWLAKLKNPEQTVTLSSEHQDMKWLSLQEAQEIS 107
           L++  +TL  +V  E       K V+  + KL NP+  ++L    Q  K L     +E  
Sbjct: 349 LRQEQETLKSQVQRESDVVDSLKDVIEIVDKLLNPDLGLSLLQVAQIFKNLLENHYEEFV 408

Query: 106 KYE 98
           +YE
Sbjct: 409 RYE 411


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -1

Query: 259 HNKTLNYEVNGEPKTVVYWLAKLK-NPE 179
           HN   +YE N  P  + +  A LK NPE
Sbjct: 407 HNFDRHYEENRAPLGLYFHAAWLKNNPE 434


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +1

Query: 217 FWVLRLLHNL 246
           FWV++LL+N+
Sbjct: 370 FWVMKLLYNV 379


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 117 CASCNESH 140
           CA CNE H
Sbjct: 71  CAKCNEKH 78


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 117 CASCNESH 140
           CA CNE H
Sbjct: 72  CAKCNEKH 79


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 117 CASCNESH 140
           CA CNE H
Sbjct: 72  CAKCNEKH 79


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 117 CASCNESH 140
           CA CNE H
Sbjct: 72  CAKCNEKH 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,314
Number of Sequences: 336
Number of extensions: 2428
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)