Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0078
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   3.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.4  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 251 VVLYKFYEYNKTLVRQVRYDNI 316
           VVL  F  YN +L  ++RYD++
Sbjct: 179 VVLLHFLTYNLSLGIKLRYDDV 200


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 251 VVLYKFYEYNKTLVRQVRYDNI 316
           VVL  F  YN +L  ++RYD++
Sbjct: 179 VVLLHFLTYNLSLGIKLRYDDV 200


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 228 YLLFYIVALIFVMFNVLFCVLWNTLPNCKY 139
           +L F +  +IFV+F+     +W  +    Y
Sbjct: 111 FLPFVVTNIIFVLFHTYEAFVWTRIMGVAY 140


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 234 YKY--LLFYIVALIFVMFNVLFCVLWNTL 154
           YKY  +L ++  + F +FNV  C L   L
Sbjct: 159 YKYYQILSHLSGIFFTVFNVAQCYLTTEL 187


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 171  VLWNTLPNCKYL 136
            + WN L NC YL
Sbjct: 1123 ICWNVLLNCVYL 1134


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 525 ISKLKSWGIIRN*NIT 572
           +SK K W + RN N+T
Sbjct: 268 VSKQKRWELARNLNLT 283


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 204 LIFVMFNVLFCVLWNTLPNCKYL 136
           +I+ +F+  FC    +LP  K+L
Sbjct: 305 IIYCLFSTHFCRTLGSLPPFKWL 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,013
Number of Sequences: 336
Number of extensions: 3370
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)