Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0061
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   0.92 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   4.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 110 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 15
           K PG S     GD + + V  H     T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 104 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 15
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 104 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 15
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 479 NLRSCNVYWMKSLTFDKWVWVA 414
           N    N+Y +  L FD ++W++
Sbjct: 116 NFAIFNLYMVLLLLFDAYLWIS 137


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +2

Query: 137 LTGNEVLKIVKQRLIK 184
           L  N++LK++++ L+K
Sbjct: 392 LQQNKILKVIRKNLVK 407


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +1

Query: 25  DVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFD 141
           D+G + RC C++  + S     +      P ++   C D
Sbjct: 163 DIGNSHRCHCSDGYSGSYCQTEINECDSAPCQNGGTCLD 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,625
Number of Sequences: 336
Number of extensions: 2899
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)