Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0058
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   4.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   4.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.9  

>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 302 PDPQIPHRTRNRH 340
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 96  KLVRCRCDKMKIKRPAVTANREKQIP 19
           K  R   D+ ++ RPA  ANR    P
Sbjct: 330 KRPRPNIDRHEVTRPAAPANRGNGFP 355


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +2

Query: 482 SKHSTRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTP 601
           S H   P  + HPS   +   S  STG+      + +  P
Sbjct: 83  STHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAP 122


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +2

Query: 482 SKHSTRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTP 601
           S H   P  + HPS   +   S  STG+      + +  P
Sbjct: 83  STHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAP 122


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +2

Query: 482 SKHSTRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTP 601
           S H   P  + HPS   +   S  STG+      + +  P
Sbjct: 83  STHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAP 122


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +2

Query: 482 SKHSTRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTP 601
           S H   P  + HPS   +   S  STG+      + +  P
Sbjct: 83  STHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAP 122


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +2

Query: 482 SKHSTRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTP 601
           S H   P  + HPS   +   S  STG+      + +  P
Sbjct: 83  STHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAP 122


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +2

Query: 482 SKHSTRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTP 601
           S H   P  + HPS   +   S  STG+      + +  P
Sbjct: 39  STHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAP 78


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +2

Query: 482 SKHSTRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTP 601
           S H   P  + HPS   +   S  STG+      + +  P
Sbjct: 83  STHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAP 122


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +2

Query: 482 SKHSTRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTP 601
           S H   P  + HPS   +   S  STG+      + +  P
Sbjct: 83  STHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAP 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,554
Number of Sequences: 336
Number of extensions: 3665
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)