Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0056
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   7.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.5  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 39  LTVRFTTKPRISSLSRPPI 95
           LT +FTTKP     ++P +
Sbjct: 173 LTTKFTTKPSTKPTNKPVV 191


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 187 RFETWFKQKVFTCLQQQ 137
           R + WFK +   C QQQ
Sbjct: 112 RVQVWFKNRRAKCRQQQ 128


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -3

Query: 541 PSSYLFLAHFTKSVCFWVSSSSARISGSTHMSRKILCSIL 422
           P  Y  +   TK + F ++S    +SG  +++   +C+++
Sbjct: 702 PIDYSLVFSETKLLLFKITSVMIAVSGLVYIATVWICTLM 741



 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 277 IYYNCEIGIVSIKFRSRWSYL 339
           I YN  + ++ + F S W YL
Sbjct: 43  ILYNIILQVLFVSFVSYWLYL 63


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 406 LEGLLRNEDPHQNLSSHSIPAPSNKTNVT 320
           LE LL  ++   + S+ SIP+PS   +++
Sbjct: 114 LEDLLALDESTVSSSTSSIPSPSTTDDLS 142


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 277 IYYNCEIGIVSIKFRSRWSYL 339
           I YN  + ++ + F S W YL
Sbjct: 61  ILYNIILQVLFVSFVSYWLYL 81


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 541 PSSYLFLAHFTKSVCFW 491
           P+   FLA+F  ++ FW
Sbjct: 241 PNWLFFLANFLTNLLFW 257


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 187 RFETWFKQKVFTCLQQ 140
           R + WFK +   C QQ
Sbjct: 170 RVQVWFKNRRAKCRQQ 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,022
Number of Sequences: 336
Number of extensions: 2546
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)