Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0027
         (309 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.18 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   0.73 
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   0.97 
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   0.97 
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   0.97 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   3.0  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    20   6.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    19   9.0  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.0 bits (52), Expect = 0.18
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 180 GIKSTFQSRPRPYVSSGAGALNLANSSSNGVIDADSPP 67
           G+ ST  S P P +S+  G    A+++SN +     PP
Sbjct: 126 GVISTNTSPPSPILSNRFGENEEADAASNVISSTPLPP 163


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 0.73
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 164 NVDLIPKFLMANGLLVKLLIHTGVTR 241
           N+D IP  ++   L+  +LIH G T+
Sbjct: 446 NIDPIPLVVVLTHLIPFMLIHQGETQ 471


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 155 RDWNVDLIPKFLMANGLLVKLLIHTGV 235
           R W   +I KFL   GL+   L   G+
Sbjct: 181 RKWQNKVIQKFLWTGGLVTSALFAYGL 207


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 155 RDWNVDLIPKFLMANGLLVKLLIHTGV 235
           R W   +I KFL   GL+   L   G+
Sbjct: 414 RKWQNKVIQKFLWTGGLVTSALFAYGL 440


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 155 RDWNVDLIPKFLMANGLLVKLLIHTGV 235
           R W   +I KFL   GL+   L   G+
Sbjct: 414 RKWQNKVIQKFLWTGGLVTSALFAYGL 440


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 125 PAP-DETYGRGRDWNVDLIPKFLMANG 202
           P+P  E   R  D N+D   K+ M+NG
Sbjct: 261 PSPLYELVDRRNDENIDAQVKYWMSNG 287


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 268 SFDGLKLQVPGDARVNKQ 215
           SF+ + L VPG+A +  Q
Sbjct: 121 SFEDVSLGVPGNAGLKDQ 138


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 218 LIHTGVTRXLEFKSIEGSYVYKGGKICKV 304
           L+ +   R    ++ +    YKGGK  KV
Sbjct: 499 LVLSSTVRAYASRAFKKIVTYKGGKYRKV 527


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,450
Number of Sequences: 336
Number of extensions: 1302
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)