Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0051
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.0  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 513 SNMSYVIDLKHTCD 554
           SN+++VID+ + CD
Sbjct: 565 SNVTFVIDVVYVCD 578


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 513 SNMSYVIDLKHTCD 554
           SN+++VID+ + CD
Sbjct: 290 SNVTFVIDVVYVCD 303


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 36  LPNVVCNL*FVFVTCLCYNPYDFENLFIFK*HISIYPVNL 155
           +  V   L  VFV  LC++PY   +L     HI     N+
Sbjct: 282 IKTVKMTLVIVFVFVLCWSPYIVFDLLQVYGHIPKTQTNI 321


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 552 RKCVLDRLRMTC 517
           RKCV D + MTC
Sbjct: 46  RKCVKDSVPMTC 57


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 317 WILGILYNILYF 282
           W++ +LYN+L F
Sbjct: 371 WVMKLLYNVLRF 382


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -3

Query: 385 WIYDRLQSRMVIDIWVD 335
           W Y++L     + +WVD
Sbjct: 238 WAYEKLNVNDGLQLWVD 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,500
Number of Sequences: 336
Number of extensions: 2680
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)