Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0004
(596 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 3.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 3.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 3.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 3.4
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 22 3.4
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 22 4.5
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 22 4.5
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 22 4.5
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 6.0
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 21 7.9
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 21 7.9
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 7.9
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 7.9
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.4
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +1
Query: 46 EFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDAL-- 219
E I P+G + +M S HH + E+ G +S D + QN +D L
Sbjct: 1152 EKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTVPQNKRDDLVN 1211
Query: 220 -YLIQDAIQKAG 252
Y I+D + G
Sbjct: 1212 PYWIEDPDVRKG 1223
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.4
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +1
Query: 46 EFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDAL-- 219
E I P+G + +M S HH + E+ G +S D + QN +D L
Sbjct: 1152 EKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTVPQNKRDDLVN 1211
Query: 220 -YLIQDAIQKAG 252
Y I+D + G
Sbjct: 1212 PYWIEDPDVRKG 1223
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.4
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +1
Query: 46 EFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDAL-- 219
E I P+G + +M S HH + E+ G +S D + QN +D L
Sbjct: 1152 EKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTVPQNKRDDLVN 1211
Query: 220 -YLIQDAIQKAG 252
Y I+D + G
Sbjct: 1212 PYWIEDPDVRKG 1223
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.4
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +1
Query: 46 EFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDAL-- 219
E I P+G + +M S HH + E+ G +S D + QN +D L
Sbjct: 1152 EKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTVPQNKRDDLVN 1211
Query: 220 -YLIQDAIQKAG 252
Y I+D + G
Sbjct: 1212 PYWIEDPDVRKG 1223
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 201 LYVWSETTFITNSRRVQSKLLLNDLFQMVVHF 106
LYV + F + +QS+ LLND+ V F
Sbjct: 340 LYVLNMEHFFSVKCSIQSESLLNDILFPVAGF 371
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 21.8 bits (44), Expect = 4.5
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 145 FGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIQKAG*LARSTLAWM*PPLSSS 303
F LD G GG A +IQN + ++ + G L + +A P + S
Sbjct: 141 FDLDWEYPGQRGGAAADIQNYATLIKEFREVWDQHGLLLTAAVAAAGPSVDLS 193
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 311 SILEELRGGYIHANVD 264
SIL ELR Y H +++
Sbjct: 322 SILHELRNNYFHMDLE 337
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 311 SILEELRGGYIHANVD 264
SIL ELR Y H +++
Sbjct: 322 SILHELRNNYFHMDLE 337
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 188 AKPPSSPTAVESNP 147
A+PPS+P+A S P
Sbjct: 413 ARPPSTPSADGSKP 426
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 190 PNIQNNKDALYLI 228
PN +NN D YLI
Sbjct: 359 PNSENNLDNFYLI 371
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 190 PNIQNNKDALYLI 228
PN +NN D YLI
Sbjct: 361 PNSENNLDNFYLI 373
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 190 PNIQNNKDALYLI 228
PN +NN D YLI
Sbjct: 359 PNSENNLDNFYLI 371
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 190 PNIQNNKDALYLI 228
PN +NN D YLI
Sbjct: 361 PNSENNLDNFYLI 373
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,941
Number of Sequences: 336
Number of extensions: 3304
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -