Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0001
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   3.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.3  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 16/72 (22%), Positives = 29/72 (40%)
 Frame = +3

Query: 72  NFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF 251
           +F P  S+  + +  +  D + K+ V N G N        +  ++    N W+ RN    
Sbjct: 463 DFQPRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDM 522

Query: 252 AL*NSKTPVMLK 287
            +   +  V LK
Sbjct: 523 FIELDRFAVSLK 534


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -2

Query: 244 GGFRATHTLRMLPYLENIFSISYLD--ALVPKLPTYTLQ 134
           G F+A + L  L  L N+ S  Y D  AL P L    L+
Sbjct: 206 GAFKAENLLVTLTVLPNVNSTVYYDPRALSPNLEFVVLE 244


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2

Query: 307 IKSTNRVFSITGVFEFYNANPGGFRATHTL 218
           +K    +  I G+F   N  PG FR    L
Sbjct: 64  LKPIYALMRIVGIFPIKNTEPGMFRVAPEL 93


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 410 SMIGGGDYDCVTC 372
           S++  G+Y CVTC
Sbjct: 864 SIVSLGEYKCVTC 876


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 563 HIVLSKSAQLLNTWFCCQ 510
           HI L+ +A ++N  FC Q
Sbjct: 268 HIKLTDTAHMINYAFCVQ 285


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 563 HIVLSKSAQLLNTWFCCQ 510
           HI L+ +A ++N  FC Q
Sbjct: 268 HIKLTDTAHMINYAFCVQ 285


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -2

Query: 235 RATHTLRMLPYLENIFSISYLDALVP 158
           R+TH+++   YL+ + + ++   L P
Sbjct: 12  RSTHSMKNFKYLKVLVTFAHFICLFP 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,054
Number of Sequences: 336
Number of extensions: 2917
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)