Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a17
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   1.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.3  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 116 QPESLHLVVLYQEKKR 69
           QPE+LHL+V Y +K +
Sbjct: 167 QPEALHLLVDYMKKNK 182


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 116 QPESLHLVVLYQEKKR 69
           QPE+LHL+V Y +K +
Sbjct: 481 QPEALHLLVDYMKKNK 496


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 116 QPESLHLVVLYQEKKR 69
           QPE+LHL+V Y +K +
Sbjct: 714 QPEALHLLVDYMKKNK 729


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 116 QPESLHLVVLYQEKKR 69
           QPE+LHL+V Y +K +
Sbjct: 714 QPEALHLLVDYMKKNK 729


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = -3

Query: 190 TAILTLWSSVFFFATT*QSSIRKQTSRRVFILLFYIRKKNDLMIFLKL 47
           TAI  L+    FF     S +R +  ++VF   ++   +N L++ + L
Sbjct: 18  TAIHPLFYVCTFFGLAPYSLVRVENGKKVFKFAWWPLTRNALLVLILL 65


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = -3

Query: 190 TAILTLWSSVFFFATT*QSSIRKQTSRRVFILLFYIRKKNDLMIFLKL 47
           TAI  L+    FF     S +R +  ++VF   ++   +N L++ + L
Sbjct: 18  TAIHPLFYVCTFFGLAPYSLVRVENGKKVFKFAWWPLTRNALLVLILL 65


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +3

Query: 603 LAFVPTVIINEKYDKDVETQAFENLKAVV 689
           L++VP  + N++  + VET  F+++ + V
Sbjct: 353 LSYVPREVYNKEISRLVETLKFQSITSAV 381


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 149 HDITEQHQKANQPESLHLVVLYQEKKRFNDFFETPAH 39
           H + EQH + +QP      ++Y  ++  N   + P H
Sbjct: 169 HHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPH 205


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 149 HDITEQHQKANQPESLHLVVLYQEKKRFNDFFETPAH 39
           H + EQH + +QP      ++Y  ++  N   + P H
Sbjct: 171 HHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPH 207


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 188 RYFDFMVFGFLLRHDITEQHQKANQP 111
           R F   V GFL RH+    H   N P
Sbjct: 734 RRFVVAVVGFLRRHNFKGLHLDWNYP 759


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,337
Number of Sequences: 336
Number of extensions: 4151
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)