Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a10
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.1  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   3.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.6  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 174 SLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGP 272
           SL GP RP+ C    + G G V +   D    P
Sbjct: 134 SLTGPVRPAACTPDSRVGYGSVGLVGGDPASSP 166


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 141 LIWTVEKARRYSLCGP 188
           +IWTV+      LCGP
Sbjct: 350 MIWTVDMDDFLGLCGP 365


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 384 NALGHEPPPKGPCRDYE 434
           +A+   PPP  P  DYE
Sbjct: 84  DAVEKRPPPDEPIDDYE 100


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +3

Query: 141 LIWTVEKARRYSLCGPPRP 197
           + W ++    + LCGP  P
Sbjct: 367 MTWAIDMDDFHGLCGPKNP 385


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 249 PADCKPGPICYNPCVPRFHH 308
           PA  +P P  +NP   + HH
Sbjct: 25  PASVQPLPRHFNPPSDKLHH 44


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 382 KLCIAIKGNNTKYVKFLYF 326
           KL +A++ NNT    F YF
Sbjct: 173 KLVLALECNNTTAEGFTYF 191


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 382 KLCIAIKGNNTKYVKFLYF 326
           KL +A++ NNT    F YF
Sbjct: 173 KLVLALECNNTTAEGFTYF 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,079
Number of Sequences: 336
Number of extensions: 3954
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)