Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b09
         (428 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   5.0  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 411 INQILTFGLLFILHFFIARCFFGFIISIFTCI*TY 307
           +N I  + L+ IL    A+C    + S++TCI  Y
Sbjct: 220 VNDIFGWTLILIL----AKCITSSLSSLYTCIAGY 250


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = -3

Query: 423 ILLRINQILTFGLLFILHFFIARCFFGFIISIFTCI*TY 307
           ILL +       ++F +H     C + F++ +F  +  Y
Sbjct: 109 ILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIY 147


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 180 CIESVGKIAFYLSIKVQ 230
           C  SVG+ +FYL + +Q
Sbjct: 47  CAASVGEGSFYLPMNMQ 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,470
Number of Sequences: 336
Number of extensions: 1407
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)