Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a22
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            25   0.74 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   0.74 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.2  

>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 539 PASAYPLDWLKNVAPPGINTP 477
           P + YP+D    +  PG+N P
Sbjct: 93  PPAGYPMDVPHGMGSPGVNVP 113


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 539 PASAYPLDWLKNVAPPGINTP 477
           P + YP+D    +  PG+N P
Sbjct: 93  PPAGYPMDVPHGMGSPGVNVP 113


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 426 NRHNPSSRCLNVFDIRRSNVACVV 355
           ++H P     N FDI RS +  V+
Sbjct: 314 SQHLPKFSAANFFDIERSTILSVL 337


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 457 PYNTNDLYRSE 425
           PYNT D YR +
Sbjct: 77  PYNTQDCYRED 87


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 334 HGKFPEENYTSY 369
           HG +P +NY +Y
Sbjct: 14  HGTYPSDNYYNY 25


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 334 HGKFPEENYTSY 369
           HG +P +NY +Y
Sbjct: 14  HGTYPSDNYYNY 25


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 334 HGKFPEENYTSY 369
           HG +P +NY +Y
Sbjct: 14  HGTYPSDNYYNY 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,309
Number of Sequences: 336
Number of extensions: 3149
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)