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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a18
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    29   0.043
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   4.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 28.7 bits (61), Expect = 0.043
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 564 PGTTIELTCEAAGSPAPSVHW 626
           PG ++ L C A+G+P P + W
Sbjct: 427 PGNSVFLKCIASGNPTPEITW 447



 Score = 27.1 bits (57), Expect = 0.13
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 576 IELTCEAAGSPAPSVHWFK 632
           + L C A G P+PS  W+K
Sbjct: 250 VALLCPAQGFPSPSFRWYK 268



 Score = 25.8 bits (54), Expect = 0.30
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 552 YAHTPGTTIELTCEAAGSPAPSVHWFK 632
           +++T G  +E  C A G+P P + W +
Sbjct: 35  FSNTTGAVVE--CSAHGNPTPDIIWVR 59



 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 555 AHTPGTTIELTCEAAGSPAPSVHW 626
           A   G+   + C+A G P P V W
Sbjct: 709 AFAQGSDAAVECKADGFPRPVVTW 732



 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +3

Query: 567 GTTIELTCEAAGSPAPSVHWFK 632
           G     TC   G+P  ++ W K
Sbjct: 342 GRPATFTCNFEGNPIKTISWLK 363



 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 567 GTTIELTCEAAGSPAPSVHW 626
           G T+ + C  AG P  SV W
Sbjct: 525 GGTLIVHCPFAGHPVDSVVW 544



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 576  IELTCEAAGSPAPSVHW 626
            + L C A G P P + W
Sbjct: 1324 VTLPCLAVGLPPPVITW 1340


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 571 VPGVCAYDGRGPCVIDKYL 515
           VPGV A   R PC I++ L
Sbjct: 197 VPGVVAMFSRKPCSINENL 215


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 571 VPGVCAYDGRGPCVIDKYL 515
           VPGV A   R PC I++ L
Sbjct: 197 VPGVVAMFSRKPCSINENL 215


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +3

Query: 477 IENGVQAKSDGSH--KYLSITQGPLPSYAHTPGTTIELTCEAA 599
           I+ G +A  +G +  KYL + +     Y H P T  E    AA
Sbjct: 429 IKFGRKADPNGDYIRKYLPVLKNMPSQYIHEPWTAPEQVQRAA 471


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 441 KHIKLLSDIDNSIENGVQAKSDGSHKYLSITQGPLPS 551
           K I+  S IDN   NG   +    H+   +   P P+
Sbjct: 218 KRIEEKSQIDNLFHNGFMQEQSTHHQGQLVVGLPAPT 254


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 120 CTCAIRIVR*GCASPRPKVIDVRNSLKK 37
           C  A+ I+   C   R +V+ + N LKK
Sbjct: 299 CVVALIILILQCGRVRSEVVKILNVLKK 326


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 120 CTCAIRIVR*GCASPRPKVIDVRNSLKK 37
           C  A+ I+   C   R +V+ + N LKK
Sbjct: 225 CVVALIILILQCGRVRSEVVKILNVLKK 252


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 145 LEHKFEIRMHVCDPDRSIGL 86
           ++H   +R   CDPDR + L
Sbjct: 174 VKHLERLREERCDPDRPLPL 193


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 513 HKYLSITQGPLPSYAHTPGT 572
           H+Y   T  PLPS  H+  T
Sbjct: 392 HQYGYNTLSPLPSSVHSHST 411


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,704
Number of Sequences: 336
Number of extensions: 3067
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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