Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a12
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.30 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.40 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.40 
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   2.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 249 YVFIFAQ*ISYFFYDFLFVY*TFFVGFCK*YFLIPF*F 136
           Y FI    + YF+Y F+          C  YF++P  F
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFF 142



 Score = 22.6 bits (46), Expect = 2.8
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -1

Query: 293 SFNFVFLMLLMVNKNMCSYLL--SEFLISSMTFCLCTKPFLLVFV 165
           +FN V L+ L+ +     +LL    F+I ++ F LCT  F   F+
Sbjct: 65  TFN-VHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFI 108


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -1

Query: 245 CSYLLSE---FLISSMTFCLCTKPFLLVFVSDTFLSLFDFGIFVLLFYYGKDKIYNLISS 75
           C YL S    F+++ MTF   T P ++ FV       F F + V +   G    + L++ 
Sbjct: 43  CIYLTSLYIWFILTQMTFSGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSG--TTFKLVAK 100

Query: 74  AISKIT 57
            +  +T
Sbjct: 101 TLENMT 106


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -1

Query: 245 CSYLLSE---FLISSMTFCLCTKPFLLVFVSDTFLSLFDFGIFVLLFYYGKDKIYNLISS 75
           C YL S    F+++ MTF   T P ++ FV       F F + V +   G    + L++ 
Sbjct: 43  CIYLTSLYIWFILTQMTFSGVTSPTIMKFVLSFRTGSFTFLMVVAVLSSG--TTFKLVAK 100

Query: 74  AISKIT 57
            +  +T
Sbjct: 101 TLENMT 106


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 170 FVSDTFLSLFDFGI 129
           F  DTFLSLF +G+
Sbjct: 79  FPKDTFLSLFIYGM 92


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 288  KGPTE*LEGFQILFWK 335
            KG  E L   +ILFWK
Sbjct: 1222 KGEVEFLSSTEILFWK 1237


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 288  KGPTE*LEGFQILFWK 335
            KG  E L   +ILFWK
Sbjct: 1222 KGEVEFLSSTEILFWK 1237


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 288  KGPTE*LEGFQILFWK 335
            KG  E L   +ILFWK
Sbjct: 1222 KGEVEFLSSTEILFWK 1237


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 288  KGPTE*LEGFQILFWK 335
            KG  E L   +ILFWK
Sbjct: 1222 KGEVEFLSSTEILFWK 1237


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 155 FLSLFDFGIFVLLFYY 108
           F+ LF   +FV+L YY
Sbjct: 324 FIILFYLSVFVILVYY 339


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 163 LTKTNKKGLVHKQKVIEEI 219
           LT  NK+GL+  + + EE+
Sbjct: 288 LTAKNKEGLIDDEGIREEV 306


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 163 LTKTNKKGLVHKQKVIEEI 219
           LT  NK+GL+  + + EE+
Sbjct: 288 LTAKNKEGLIDDEGIREEV 306


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 532 VLLPKGPLADFSHTIEPHL 588
           +L P G +   SHT+E HL
Sbjct: 118 ILTPNGKIVFVSHTVE-HL 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,142
Number of Sequences: 336
Number of extensions: 3527
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)