Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10b05
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    28   0.092
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.49 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.85 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.85 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.6  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 27.9 bits (59), Expect = 0.092
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 586 SEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAI 723
           +E F    + F+  V      FE+R N    ++ +L S EKL+T +
Sbjct: 464 AESFDDMKDKFRRWVSAMSRPFEVRFNPHTGRVEVLDSVEKLETLV 509


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 202 VKWDSFKCNTHSFK-YRYVHNDTNAKFYNVIDFCKGLEI 315
           V WD  + NTH +K  ++V  D+     N +++ K L +
Sbjct: 313 VVWDDTQKNTHMYKGDQWVAFDSPKAISNKVEYAKSLNL 351


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -2

Query: 594  FFAVC--IQFFYMF*NRFNFVAQIIT 523
            FFA+   IQFF M  +RF   +QIIT
Sbjct: 1290 FFALLMVIQFFAMMIHRFGTFSQIIT 1315


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -2

Query: 594  FFAVC--IQFFYMF*NRFNFVAQIIT 523
            FFA+   IQFF M  +RF   +QIIT
Sbjct: 1290 FFALLMVIQFFAMMIHRFGTFSQIIT 1315


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 275 FAFVSLCTYLYLKLCVLHLNESHLTMC 195
           +AF+    +L L +C+ +    HL  C
Sbjct: 243 YAFILFTVHLLLLVCIYYFYYMHLLFC 269


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 398 PNAISTRWAHC 430
           PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 398 PNAISTRWAHC 430
           PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 360 NLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 226
           N+I + + + YVV        K    VEF +++V   S L+T+ +
Sbjct: 353 NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 397


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 360 NLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 226
           N+I + + + YVV        K    VEF +++V   S L+T+ +
Sbjct: 78  NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 122


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 517 GERD--DLRDKIESVLKHVKKLNTNSEKFMVTHETFK 621
           G +D  D +DK+  V   +K+        MVT++  K
Sbjct: 470 GRKDEADYKDKLHKVAPRIKERMMKEGSMMVTYQAQK 506


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,860
Number of Sequences: 336
Number of extensions: 3082
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)