Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10a15
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 442 EHERQMDRCVTPSTVQINLYDDNEDYL 522
           + E+ M+  +TP        DDN+D+L
Sbjct: 121 KEEKDMETTLTPCASPNRKPDDNQDHL 147


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +1

Query: 67  RLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNN 180
           R+P + +DT+ Q+L P  + +V  +  +   R+++  N
Sbjct: 645 RMPRDGVDTLQQFLTP--NMRVQEVVIQFSNRIVKPRN 680


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -1

Query: 395 KFSNDVNGRF--NVTMRTSSGMHLLKNAQLALPNE 297
           +FS+ V  +   ++  R S+   LLKN  L+ P+E
Sbjct: 73  RFSSGVGRKAWKHLDFRNSATAELLKNPSLSSPDE 107


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -1

Query: 395 KFSNDVNGRF--NVTMRTSSGMHLLKNAQLALPNE 297
           +FS+ V  +   ++  R S+   LLKN  L+ P+E
Sbjct: 73  RFSSGVGRKAWKHLDFRNSATAELLKNPSLSSPDE 107


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 594 CLFRRQHNNFVFIFVYNLQNCR 659
           C+FR ++ N   +    LQN R
Sbjct: 167 CIFRGKYRNINLLLTEQLQNRR 188


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = +1

Query: 379 TSLENFLSKQFLWYKLARKLIEHERQMDRC 468
           T + N + +++ W  + R + +  R  D C
Sbjct: 146 TKVYNSMKREYYWPNMYRTIKKRLRSCDLC 175


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 199 LTPANYHFTTDQFICNY 249
           LT    H  TD+ IC Y
Sbjct: 13  LTTTQIHAATDKVICYY 29


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 474 CYTAIHLTFVFNQLSRQ 424
           C+   HL    NQLSR+
Sbjct: 287 CFNLYHLASKSNQLSRE 303


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 474 CYTAIHLTFVFNQLSRQ 424
           C+   HL    NQLSR+
Sbjct: 287 CFNLYHLASKSNQLSRE 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,983
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)