Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a01
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   3.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   3.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   3.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.0  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 362 EHTQIETKVLLFMVRCNNAS 303
           EH  ++T  L+  + CNN +
Sbjct: 165 EHILVQTNKLVLALECNNTT 184


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 362 EHTQIETKVLLFMVRCNNAS 303
           EH  ++T  L+  + CNN +
Sbjct: 165 EHILVQTNKLVLALECNNTT 184


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 455 GNQTNDTRLNVLCGTALLGH 396
           G +  D +LN LC T L+ H
Sbjct: 437 GREFFDEKLNALCMTWLMDH 456


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -2

Query: 517 KHVPGI*SKQTCSSNKYLT 461
           K +PG  ++++CS+ +Y+T
Sbjct: 774 KVIPGRITQKSCSTKRYVT 792



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 371 SVNEHTQIETKVLLFMVRCNNASCSK 294
           SV EH ++ +   +  + C++A CS+
Sbjct: 332 SVFEHVKLGSLYHISFMACSSAGCSQ 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,518
Number of Sequences: 336
Number of extensions: 3455
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)