Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0038
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   6.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   6.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 20/80 (25%), Positives = 34/80 (42%)
 Frame = +2

Query: 461 ILYRKHCNHFTLDTFKNINLRFYRSFGFFXXXXXXAYY*LY*WMECLIIFSLSCSKKKTL 640
           I++  H        F N++L F     +F          +Y +    IIF++       L
Sbjct: 174 IIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPC-IYYFYSAFIIFTIHL-----L 227

Query: 641 RYCLDVLSLPYYHYYYFNIL 700
            YC+ ++ L  Y++YY  IL
Sbjct: 228 FYCVLIILLCIYYFYYAFIL 247


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 180  LITLKLIFVNIKSPFNIK 127
            L+TLK  +++IK PF +K
Sbjct: 1285 LLTLKKDYLHIKWPFGVK 1302


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 180  LITLKLIFVNIKSPFNIK 127
            L+TLK  +++IK PF +K
Sbjct: 1285 LLTLKKDYLHIKWPFGVK 1302


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 665 LPYYHYYYFNILHIRGICLDRTL*TVSVRF 754
           +PY H Y   ++H+ G+       TV++ F
Sbjct: 135 VPYKHLYVNILIHLSGLVTIVATLTVTIIF 164


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 665 LPYYHYYYFNILHIRGICLDRTL*TVSVRF 754
           +PY H Y   ++H+ G+       TV++ F
Sbjct: 135 VPYKHLYVNILIHLSGLVTIVATLTVTIIF 164


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +2

Query: 599 LIIFSLSCSKKK--TLRYCLDVLSLPYY 676
           L+ F+   SK +  +LR+CL++LS+  Y
Sbjct: 302 LVTFTPDRSKFRPSSLRFCLNILSIFTY 329


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 229  IYSEVVWIVRFIHNK 273
            I++E +WI   IH K
Sbjct: 1167 IFTEGIWICSLIHRK 1181


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +2

Query: 599 LIIFSLSCSKKK--TLRYCLDVLSLPYY 676
           L+ F+   SK +  +LR+CL++LS+  Y
Sbjct: 27  LVTFTPDRSKFRPSSLRFCLNILSIFTY 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,756
Number of Sequences: 336
Number of extensions: 3777
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)