Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0041
         (314 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.43 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   2.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   9.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   9.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   9.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   9.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   9.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.43
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 35   LVPNSCSPGIH 3
            LVP +C+PG+H
Sbjct: 1229 LVPQNCAPGLH 1239


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 72  VTSVCLRTHDRL 37
           +  +C+R+HD+L
Sbjct: 512 IVDICIRSHDKL 523


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = +1

Query: 70  NSQNSYSFIVAASRVLTVLCQWMFSSVEI 156
           N   S  FI+ +   +T++ +W F  + +
Sbjct: 125 NFFGSIQFIIISKHWVTIMKEWSFMEMSM 153


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 117 DCSVPVDVQLSG 152
           DC +  DV LSG
Sbjct: 556 DCCIRYDVSLSG 567


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 273 GGSISSPRXICXRLRGSFLMIF 208
           GG+I  P  I   L G+F+  F
Sbjct: 918 GGTILGPGTIFLMLVGAFVAAF 939


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 273 GGSISSPRXICXRLRGSFLMIF 208
           GG+I  P  I   L G+F+  F
Sbjct: 918 GGTILGPGTIFLMLVGAFVAAF 939


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 273 GGSISSPRXICXRLRGSFLMIF 208
           GG+I  P  I   L G+F+  F
Sbjct: 918 GGTILGPGTIFLMLVGAFVAAF 939


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 273 GGSISSPRXICXRLRGSFLMIF 208
           GG+I  P  I   L G+F+  F
Sbjct: 918 GGTILGPGTIFLMLVGAFVAAF 939


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 85  YSFIVAASRVLTVLCQWMF 141
           Y+FI+    +L +LC + F
Sbjct: 118 YAFIIFTVHLLFLLCIYYF 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,586
Number of Sequences: 336
Number of extensions: 955
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)