Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0040
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.3  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   4.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.3  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.9  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 226 GAYVRTSSTVHSSNKPLVFPW 288
           G     S +  SSN P ++PW
Sbjct: 183 GTNNNNSKSSQSSNPPQIYPW 203


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 218 PAAERTYVLALPYIARTSRWYFPGTPF 298
           P AE      LP++    +  FPG PF
Sbjct: 344 PKAEEAKPETLPFLNLQQQLPFPGYPF 370


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 226 GAYVRTSSTVHSSNKPLVFPW 288
           G     S +  SSN P ++PW
Sbjct: 183 GTNNNNSKSGQSSNPPQIYPW 203


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 226 GAYVRTSSTVHSSNKPLVFPW 288
           G     S +  SSN P ++PW
Sbjct: 183 GTNNNNSKSGQSSNPPQIYPW 203


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 226 GAYVRTSSTVHSSNKPLVFPW 288
           G     S +  SSN P ++PW
Sbjct: 183 GTNNNNSKSGQSSNPPQIYPW 203


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 226 GAYVRTSSTVHSSNKPLVFPW 288
           G     S +  SSN P ++PW
Sbjct: 183 GTNNNNSKSGQSSNPPQIYPW 203


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 226 GAYVRTSSTVHSSNKPLVFPW 288
           G     S +  SSN P ++PW
Sbjct: 139 GTNNNNSKSGQSSNPPQIYPW 159


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 226 GAYVRTSSTVHSSNKPLVFPW 288
           G     S +  SSN P ++PW
Sbjct: 183 GTNNNNSKSGQSSNPPQIYPW 203


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 226 GAYVRTSSTVHSSNKPLVFPW 288
           G     S +  SSN P ++PW
Sbjct: 183 GTNNNNSKSGQSSNPPQIYPW 203


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 177 GSALSPYLFILIMDA 133
           GSA++ +LF+LI D+
Sbjct: 10  GSAIAGFLFLLICDS 24


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 243 STYVRSAAGDSDEFSVTVGLHQ 178
           S+  +S AGD D FS T  + Q
Sbjct: 34  SSVSQSEAGDEDRFSFTSSMVQ 55


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 62  SPTRTMSSANSIHQGAS 112
           SP R  +S+N  H GA+
Sbjct: 182 SPNRRRASSNPCHNGAT 198


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 31  CQSPLYLRPFLSNENNVVGEQHTPRRLFLYVRC*GIHY 144
           C +P+   P      N+     TP +LFL  R  G+ Y
Sbjct: 29  CLAPIPQPPAYPIIGNLFDIMRTPEQLFLAERERGLKY 66


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 430 RHFFPAPIVRKI 395
           R+FFP  ++RK+
Sbjct: 227 RNFFPVDLIRKV 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,923
Number of Sequences: 336
Number of extensions: 4289
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)