Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0035
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.7  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.7  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 208 LKEVTCKWKSKTYYINIQEI*RKVF*N 128
           ++  TC WK+K    ++ E  RKV  N
Sbjct: 82  IERQTCDWKTKVNNCDVIEKPRKVLPN 108


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 516 HTAHLMVSGYRRPWTSAMPGAEPS 445
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 155 LYINVVGFGFPFTCN 199
           +++   GF  PFTCN
Sbjct: 488 IHMGYHGFHNPFTCN 502


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -2

Query: 400 HFFNI---YV*MYFHSFIIWTSSVLHYVFCKRHQVST*TCA*TFNYYRK*VFY 251
           HFF     Y+  Y    I++   +  +     + V++  C  TF++Y K VFY
Sbjct: 181 HFFKKQFHYIFTYMPYNIVFGLCLTTFGLLPVNGVTSEKCNLTFSWYSKKVFY 233


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 480 GDGNHSPSGGP 512
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 116 LIRHILKYFSLNFLYINVVGFGFPFTC 196
           L+  IL +  ++  Y NV    F +TC
Sbjct: 166 LVYFILAFACISIAYTNVSTDAFFYTC 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,651
Number of Sequences: 336
Number of extensions: 2757
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)