Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0022
         (347 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   2.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   6.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    20   6.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    20   6.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
 Frame = +2

Query: 134 YPILGVSTHCHNYIFGWN---CETLCI 205
           Y I G  T C  Y   WN    E LCI
Sbjct: 103 YGIFGHETSCTRYWTCWNGTATEQLCI 129


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 202 YHLYCPLK 225
           +H YCP+K
Sbjct: 423 FHCYCPIK 430


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 114 ELLLDPNIRFWVFLPIVIITFLVGIVRHY 200
           ++LL   + +  F  IVI TFL   + HY
Sbjct: 212 KILLMIQLYYLYFDVIVISTFLQLFLEHY 240


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 114 ELLLDPNIRFWVFLPIVIITFLVGIVRHY 200
           ++LL   + +  F  IVI TFL   + HY
Sbjct: 138 KILLMIQLYYLYFDVIVISTFLQLFLEHY 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,855
Number of Sequences: 336
Number of extensions: 1715
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)