Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0093
(397 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 27 0.067
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 23 1.1
DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory pro... 22 2.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 2.5
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 21 3.4
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 4.4
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 4.4
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 21 4.4
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 5.9
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 5.9
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 20 7.7
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 20 7.7
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 27.1 bits (57), Expect = 0.067
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 36 KTQQWVTSKTHTSRPETPGPQPPS 107
+T W++S + P TP P PPS
Sbjct: 102 RTDDWLSSPSGNVPPLTPSPGPPS 125
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 23.0 bits (47), Expect = 1.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 137 GFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN 247
GF+++ KIV +S + GH + L+G IFN
Sbjct: 114 GFLLILTPNGKIVFVSHTVEHLLGHLQTDLMGQSIFN 150
>DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory
protein 1 protein.
Length = 112
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 96 EAPESPVSKCVSSMSPIVV 40
EAP PV + + S++P+V+
Sbjct: 55 EAPCDPVGRRLKSLAPLVL 73
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 2.5
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 78 PETPGPQPPSPCNVRPCVKTVSLC*RVVH 164
P+ GPQP S C+ C R +H
Sbjct: 1268 PKMGGPQPYSACSENAFAAYPGDCTRYLH 1296
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 21.4 bits (43), Expect = 3.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 69 TSRPETPGPQPPSPC 113
TSRP+ PQP C
Sbjct: 93 TSRPKLQEPQPSQHC 107
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 57 SKTHTSRPETPGPQPPS 107
S +HT TP +PPS
Sbjct: 60 STSHTDGASTPDVRPPS 76
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 57 SKTHTSRPETPGPQPPS 107
S +HT TP +PPS
Sbjct: 216 STSHTDGASTPDVRPPS 232
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 21.0 bits (42), Expect = 4.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 54 TSKTHTSRPETPGPQPPSPCNVRPCVKTVSLC 149
T+ T +S Q P P +VRP V C
Sbjct: 206 TASTASSASNYSPSQSPEPESVRPLSLVVRRC 237
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 20.6 bits (41), Expect = 5.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 253 FTIEDINPNQVNFSVXVLSGFG 188
FT+EDI+P + G G
Sbjct: 39 FTVEDIDPTLCTHLIYSFVGLG 60
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 251 KKYEDICPSTHNMDV 295
K YED CP++++ V
Sbjct: 665 KVYEDYCPTSNSGSV 679
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 20.2 bits (40), Expect = 7.7
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = -3
Query: 383 HAGHRCQPSGSGSHHPRYQ 327
H GH Q H P +Q
Sbjct: 166 HMGHHMQEQHPQHHQPHHQ 184
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 20.2 bits (40), Expect = 7.7
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = -3
Query: 383 HAGHRCQPSGSGSHHPRYQ 327
H GH Q H P +Q
Sbjct: 168 HMGHHMQEQHPQHHQPHHQ 186
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,955
Number of Sequences: 336
Number of extensions: 2389
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8435920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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