Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0075
(740 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 24 1.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.1
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 24 1.1
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 2.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.6
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 4.5
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 22 4.5
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 524 LATASNFSKNIPSTIDISSIIRCLHFLHFCATNGIL 417
+A A+ P + II CL HFC T G L
Sbjct: 286 IAIATFIQSLAPLNSAANPIIYCLFSTHFCRTLGSL 321
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 619 VYSCPLLVVVVRNHHKESVECHQM 548
V S +L VVV N+H + + H+M
Sbjct: 285 VASSVVLTVVVLNYHHRTADIHEM 308
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 619 VYSCPLLVVVVRNHHKESVECHQM 548
V S +L VVV N+H + + H+M
Sbjct: 285 VASSVVLTVVVLNYHHRTADIHEM 308
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 619 VYSCPLLVVVVRNHHKESVECHQM 548
V S +L VVV N+H + + H+M
Sbjct: 285 VASSVVLTVVVLNYHHRTADIHEM 308
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 619 VYSCPLLVVVVRNHHKESVECHQM 548
V S +L VVV N+H + + H+M
Sbjct: 285 VASSVVLTVVVLNYHHRTADIHEM 308
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 619 VYSCPLLVVVVRNHHKESVECHQM 548
V S +L VVV N+H + + H+M
Sbjct: 285 VASSVVLTVVVLNYHHRTADIHEM 308
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 387 PTTITYASKSMKSGSTNVTSCDPSGCS 307
P T TY+ SM S +C P G S
Sbjct: 22 PMTPTYSMNSMSCVSMPSMNCSPQGAS 48
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.0
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 724 ESK*ILDLFVYVPVLVQNK-VQYTYPNNGIENKISSVYSCPLLVVVVR 584
ESK LDL YVP V NK + ++ S+V + L+V+ R
Sbjct: 345 ESKLSLDLLSYVPREVYNKEISRLVETLKFQSITSAVVTYELIVIQFR 392
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 569 FFVVISYNYHQ*WTRINRRDFVFNPIV 649
F V++Y+YH W R +F +V
Sbjct: 828 FMSVMTYDYHGAWERQTGHNFTMEYLV 854
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -1
Query: 437 CATNGILVALSHKFSIDPLPSPMPA 363
CA+NG++ L+ S++ L + +P+
Sbjct: 55 CASNGLVTTLASGSSLNGLTNNVPS 79
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 361 FAGIGDGSGSIENLCERATKIPLVAQKWRKCKHLI 465
F I DG ++ N + T+ P K KHL+
Sbjct: 200 FRVINDGIQALINDSRKVTRFPTELTFCNKIKHLV 234
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,796
Number of Sequences: 336
Number of extensions: 4659
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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