SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060056.seq
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    63   3e-12
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    30   0.017
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   3.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   3.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.3  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   5.8  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   5.8  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   5.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.7  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 62.9 bits (146), Expect = 3e-12
 Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
 Frame = +3

Query: 63  YLVLDEADRMLDMGFEPQIRKIIE-QIRP---DRQTLMWSATWPKEVKKLAEDYLGDYIQ 230
           Y VLDEADRMLDMGF   + +++  Q  P   +RQTLM+SAT+P+EV++LA  +L +YI 
Sbjct: 312 YFVLDEADRMLDMGFLGDVEEMLSHQSMPATGERQTLMFSATFPEEVQQLAGKFLLNYIF 371

Query: 231 INIG 242
           I +G
Sbjct: 372 IAVG 375



 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 22/37 (59%), Positives = 31/37 (83%)
 Frame = +1

Query: 517 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 627
           +LVAT VAARGLD+  +++VIN+D P S ++Y+HRIG
Sbjct: 462 VLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIG 498



 Score = 54.8 bits (126), Expect = 7e-10
 Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
 Frame = +2

Query: 302 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 481
           +K +KL  +L++      P  +T+IFVETKR A+ ++  +      +  +HGD+ Q ER+
Sbjct: 395 DKRSKLVSILEKA-----PNERTLIFVETKRNADFLATFLSEQNIQSTSIHGDRYQSERE 449

Query: 482 EVLYQFKEGXXXXXXXXXXXXXXXXXXVSNMXXXXXXXXXXXXTSIVLGRTGRSKSKGTS 661
           + L  FK G                                      +GRTGR  +KG +
Sbjct: 450 KALLDFKTGHRKVLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIGRTGRVGNKGKA 509

Query: 662 YAFFTPSNSRQ-AKDLVSVLQEA 727
            +FF     R  A DL  +L +A
Sbjct: 510 TSFFDEDQDRNLASDLAKILSQA 532


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 149 QTDFDVVSYLAQRSKETC*GLLGRLHSDQYRIITTSANHNILQIVDIC-QEHEK 307
           +T F V + + +R       +L +L+ ++YR +      +  QIVDIC + H+K
Sbjct: 469 ETQFVVANIILRRRFALINSILRKLYKNKYRKLIVDGKKSEEQIVDICIRSHDK 522


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 622 YDGCNPPTNLDNQNLLH 572
           Y+G N   NLDN  L+H
Sbjct: 358 YEGPNSENNLDNFYLIH 374


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 374 IFVETKRKAENISRNIRRYGWPAVC 448
           IFV+++     I  N+    W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 374 IFVETKRKAENISRNIRRYGWPAVC 448
           IFV+++     I  N+    W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 374 IFVETKRKAENISRNIRRYGWPAVC 448
           IFV+++     I  N+    W AVC
Sbjct: 541 IFVKSRPSPATIISNVTVISWQAVC 565


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 622 YDGCNPPTNLDNQNLLH 572
           Y G N   NLDN  L+H
Sbjct: 356 YGGPNSENNLDNFYLIH 372


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 622 YDGCNPPTNLDNQNLLH 572
           Y G N   NLDN  L+H
Sbjct: 358 YGGPNSENNLDNFYLIH 374


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 622 YDGCNPPTNLDNQNLLH 572
           Y G N   NLDN  L+H
Sbjct: 356 YGGPNSENNLDNFYLIH 372


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -1

Query: 392 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 306
           SW + K  F  +++ F++ +   + +YF+
Sbjct: 419 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 447


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -1

Query: 392 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 306
           SW + K  F  +++ F++ +   + +YF+
Sbjct: 426 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,384
Number of Sequences: 336
Number of extensions: 4198
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -