Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021031
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   105   5e-25
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   105   5e-25
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    95   4e-22
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    29   0.039
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.9  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  105 bits (251), Expect = 5e-25
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = +2

Query: 572 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 736
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTH
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTH 55


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  105 bits (251), Expect = 5e-25
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = +2

Query: 572 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 736
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTH
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTH 55


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 95.5 bits (227), Expect = 4e-22
 Identities = 43/55 (78%), Positives = 52/55 (94%)
 Frame = +2

Query: 572 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 736
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTH
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTH 54


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +3

Query: 165 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHIFDAKRLI--GRKXEDATVQADMKHWPFEV 338
           DH  +  +H +  SH   +QEP G     H F   RL+       D  + ADM  + +  
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYGYNT 398

Query: 339 VS 344
           +S
Sbjct: 399 LS 400


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 117 LPAREGGDHRQRPGQQDH 170
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 527 TKDAGTISGLNVLRIINEPTAA 592
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 354 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 470
           KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 244 KPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,441
Number of Sequences: 336
Number of extensions: 3983
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)