Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021009
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.7  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   3.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   3.9  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 154 VADIPLLVHHPTDLVYREIHHF 89
           V  + L++H  T L+YR   HF
Sbjct: 678 VIGMNLIIHVGTQLIYRPFSHF 699


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/62 (20%), Positives = 24/62 (38%)
 Frame = -1

Query: 647 YNTLERLV*FFSFKLELKKSTVHFVHEQNRLDALGNSLTQYCFGLYNTPDIQSTTTRAPS 468
           Y+  E      S+    +K+T  +      L  +    + +    YN P   S+  + P+
Sbjct: 12  YSQFENQAVLQSYNFLQEKTTYEYYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPT 71

Query: 467 VT 462
           VT
Sbjct: 72  VT 73


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/62 (20%), Positives = 24/62 (38%)
 Frame = -1

Query: 647 YNTLERLV*FFSFKLELKKSTVHFVHEQNRLDALGNSLTQYCFGLYNTPDIQSTTTRAPS 468
           Y+  E      S+    +K+T  +      L  +    + +    YN P   S+  + P+
Sbjct: 3   YSQFENQAVLQSYNFLQEKTTYEYYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPT 62

Query: 467 VT 462
           VT
Sbjct: 63  VT 64


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 557 LDALGNSLTQYCFGLYNTPDIQSTTTRAPSVTRS 456
           L  + N L+ YCF LY+     +  +R   VT++
Sbjct: 277 LSIVKNCLS-YCFNLYHLASKSNQLSREAKVTKT 309


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 557 LDALGNSLTQYCFGLYNTPDIQSTTTRAPSVTRS 456
           L  + N L+ YCF LY+     +  +R   VT++
Sbjct: 277 LSIVKNCLS-YCFNLYHLASKSNQLSREAKVTKT 309


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 152 CGYSASCPSSHGSRLP*NSPF*MVYDF 72
           CG+    PS HG      +P+   YD+
Sbjct: 467 CGFGPWKPSMHGGVCDPYTPWHTFYDY 493


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = -3

Query: 786  SENCLRVKPTHEDQTRNQQSPC*GRHAPHPWDHH 685
            S  C   KP H+  T + Q P    + P    +H
Sbjct: 1149 SAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNH 1182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,293
Number of Sequences: 336
Number of extensions: 4357
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)