Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021004
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   9.9  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.9  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 129 SLIYVTIRYLLNLNALSLDYNLDRQLQLINYKILIYI 239
           S I++ +RY+   + L  DY + R  +   Y+IL ++
Sbjct: 132 SRIHLFVRYVFVTSYLLFDYFVQRNQEYKYYQILSHL 168


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 531 HILLLFTIMYVYY 569
           + + LFT+ Y+YY
Sbjct: 149 YFIYLFTVYYIYY 161


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 349 CIFKQKHRDINHFLCFQ 399
           CIF+ K+R+IN  L  Q
Sbjct: 167 CIFRGKYRNINLLLTEQ 183


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 531 HILLLFTIMYVYY 569
           H+LLL  I Y YY
Sbjct: 251 HLLLLVCIYYFYY 263


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 304 NQRYKQTVNELRIQSCIFKQKHRDINHF 387
           N+ Y +   E   +SC F      +NHF
Sbjct: 43  NEMYHRVKEEPIYESCRFSINQPYLNHF 70


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 304 NQRYKQTVNELRIQSCIFKQKHRDINHF 387
           N+ Y +   E   +SC F      +NHF
Sbjct: 43  NEMYHRVKEEPIYESCRFSINQPYLNHF 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,117
Number of Sequences: 336
Number of extensions: 3098
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)