Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0032
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    27   0.16 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          27   0.21 
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    26   0.37 
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    26   0.37 
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    26   0.37 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.86 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   4.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   6.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 380 LSNTVGTYSSGNSFLVYTYSKQVLPTIPS---PTTVIFNL 270
           LSN   TY   N +L+  +SK  +P +P    P T+++ L
Sbjct: 22  LSNKNNTYLVLNKYLLVKHSKPKMPLLPKTPLPLTLLYKL 61


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 243 RGTHHGNDEEIEDNCCWRWYGWQDLLAICI 332
           RGT  GN+  I+      W+ W  ++ IC+
Sbjct: 457 RGTLEGNNMGIQPYDSLLWHTWMPVMRICV 486


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 256 MGTTKRLKITVVGDGMVGKTCLLYVYTR 339
           MG+     + VVG G+VG  C +++  R
Sbjct: 1   MGSNNVNSVIVVGGGLVGSLCAIFMAKR 28


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 256 MGTTKRLKITVVGDGMVGKTCLLYVYTR 339
           MG+     + VVG G+VG  C +++  R
Sbjct: 1   MGSNNVNSVIVVGGGLVGSLCAIFMAKR 28


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 256 MGTTKRLKITVVGDGMVGKTCLLYVYTR 339
           MG+     + VVG G+VG  C +++  R
Sbjct: 1   MGSNNVNSVIVVGGGLVGSLCAIFMAKR 28


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 344 NFLKNMCPRYLTIMSATSPWMERT*KWRYG 433
           NF +  C RY       +  + +  KWR+G
Sbjct: 543 NFYRKFCARYSAATQDLNKLLRKGEKWRWG 572


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 649 TQEGKKLKKKIRAAHLVECS 708
           T EGKKLK  I  A   +C+
Sbjct: 52  TPEGKKLKSTIPEALSTDCA 71


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 517 GSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSDK 636
           G  +S  NV+H    + + F   +P +   TK    SSDK
Sbjct: 240 GMAASKLNVLHWHITDSQSFPLELPQLPNMTKFGAYSSDK 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,275
Number of Sequences: 336
Number of extensions: 4051
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)