Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0029
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 105  TGLFLTIYYTANIEIAFYRVNYICRNVNY 191
            TG    +YY    E+ FY  N+   ++NY
Sbjct: 1600 TGHVAPLYYHPEDEVVFYNANF---SINY 1625


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 419 CNPLFRNYISKLNLRGIC 472
           CNP++  Y  K    G+C
Sbjct: 566 CNPIYDAYCQKHYANGLC 583


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 171 ICRNVNYG*IIRTLHANGASFFFICIYLH 257
           +C ++N+  +I  LH +    FF   Y H
Sbjct: 160 MCTSMNFVLLIGDLHTSIYIIFFDMFYQH 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,044
Number of Sequences: 336
Number of extensions: 2227
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)