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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0026
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   5.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   5.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   5.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   5.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   5.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   5.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   5.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   9.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    20   9.5  

>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 358 DENNSDSGSKSNAP 399
           + NNS SG  SN P
Sbjct: 185 NNNNSKSGQSSNPP 198


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 358 DENNSDSGSKSNAP 399
           + NNS SG  SN P
Sbjct: 185 NNNNSKSGQSSNPP 198


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 358 DENNSDSGSKSNAP 399
           + NNS SG  SN P
Sbjct: 185 NNNNSKSGQSSNPP 198


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 358 DENNSDSGSKSNAP 399
           + NNS SG  SN P
Sbjct: 185 NNNNSKSGQSSNPP 198


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 358 DENNSDSGSKSNAP 399
           + NNS SG  SN P
Sbjct: 141 NNNNSKSGQSSNPP 154


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 358 DENNSDSGSKSNAP 399
           + NNS SG  SN P
Sbjct: 185 NNNNSKSGQSSNPP 198


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 358 DENNSDSGSKSNAP 399
           + NNS SG  SN P
Sbjct: 185 NNNNSKSGQSSNPP 198


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 48   NKYINVNVVSGEHINS 95
            N+Y N NVV+  H NS
Sbjct: 1494 NEYGNNNVVARNHRNS 1509


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 48   NKYINVNVVSGEHINS 95
            N+Y N NVV+  H NS
Sbjct: 1494 NEYGNNNVVARNHRNS 1509


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 48   NKYINVNVVSGEHINS 95
            N+Y N NVV+  H NS
Sbjct: 1494 NEYGNNNVVARNHRNS 1509


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 48   NKYINVNVVSGEHINS 95
            N+Y N NVV+  H NS
Sbjct: 1494 NEYGNNNVVARNHRNS 1509


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 26  SSIYSMCE*IYKCQCSF 76
           S + +MC   Y+ +CSF
Sbjct: 175 SGLIAMCGMYYRDECSF 191


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 26  SSIYSMCE*IYKCQCSF 76
           S + +MC   Y+ +CSF
Sbjct: 408 SGLIAMCGMYYRDECSF 424


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 26  SSIYSMCE*IYKCQCSF 76
           S + +MC   Y+ +CSF
Sbjct: 408 SGLIAMCGMYYRDECSF 424


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 168 KHYVTLSCKSSTHFFNK 218
           KHY   SC+    FF +
Sbjct: 96  KHYGVYSCEGCKGFFKR 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,767
Number of Sequences: 336
Number of extensions: 1937
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

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