Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0010
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -3

Query: 484 QFTRKADDLYTNVTISLQDALTGFTLELEHLDGHKVSVSRDKVTWAGAR 338
           +F  K   L+ N+     D   G+TL ++  DG  V+    K T+ GAR
Sbjct: 156 RFLIKVTILHPNIVKLKLDTSEGYTLSVKPRDGEIVANITAK-TFFGAR 203


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 644 TFITHCLLHHLESSWTQVSCYHLL 715
           T + + L   L  +WT +S YHL+
Sbjct: 184 TILNNYLTIVLGETWTSLSVYHLV 207


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 644 TFITHCLLHHLESSWTQVSCYHLL 715
           T + + L   L  +WT +S YHL+
Sbjct: 180 TILNNYLTIVLGETWTSLSVYHLV 203


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 709  MVTRNLGPGRFQMMQQTVCDECPNVKFVNEERLLE 605
            +V +N  PG     ++ +CD    VK V  ++L +
Sbjct: 1229 LVPQNCAPGLHYNPEEHMCDWKYKVKCVGRKQLAQ 1263


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +3

Query: 36  FFFLQIKMVFLFFIKPSHARLHSGNKNLMKPHSVQL*LLVYYH 164
           F+  QI  +    +K   +R    N+N ++    +    VYYH
Sbjct: 315 FYEFQIIELMTSVVKSLESRYADLNENFLQCQDEKFESFVYYH 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,931
Number of Sequences: 336
Number of extensions: 3965
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)