Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B06
         (1001 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   1.2  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   2.1  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   3.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   6.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   8.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 456 NLXWDVNSEGSWV 494
           N  WDV+S GSW+
Sbjct: 187 NAWWDVHSTGSWL 199


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 96  ALVLCGLLAAVSAAPQYY 149
           A++LC  L AVSAA   Y
Sbjct: 6   AVILCAFLVAVSAAENKY 23


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 252 EMQHLDDMMKELSLKFPSI-INEGRVEGD 335
           EM++L+ ++KE    +PS+ + E R+E D
Sbjct: 43  EMKYLEMVLKEAQRLYPSVPVIERRLEVD 71


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 852 PPXPXXPPXXXPXXXPP 902
           PP P  PP   P   PP
Sbjct: 175 PPLPQVPPLPLPPIFPP 191


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 705 SXLQLSRSHWXSGLSPSGRQRPA 637
           S + L  S+W   LSP  RQ  A
Sbjct: 392 STIDLRSSYWQIPLSPESRQYTA 414


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 90  MIALVLCGLLAAVSAAPQYYHGSSHWPYHHYD 185
           MI L+    + AVSAAP  ++ S    Y H D
Sbjct: 1   MIPLIAIAGILAVSAAPAEFYESR---YDHLD 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,152
Number of Sequences: 336
Number of extensions: 3793
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28547508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)