Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A24
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.4  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   7.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   7.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   7.1  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 115 SCYRVQSGRSFARL 156
           SC  +Q+G  FARL
Sbjct: 383 SCSNIQTGEQFARL 396


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 115 SCYRVQSGRSFARL 156
           SC  +Q+G  FARL
Sbjct: 390 SCSNIQTGEQFARL 403


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 39  ESGYHSTNPYHNSIHATDVT 98
           E GYH+    H    A D+T
Sbjct: 42  EEGYHTPESLHYEGRAVDIT 61


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 389 FLQLFLEIWSFFQETALDDA 330
           FLQLFLE +       LD A
Sbjct: 232 FLQLFLEHYEVINRQTLDTA 251


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 389 FLQLFLEIWSFFQETALDDA 330
           FLQLFLE +       LD A
Sbjct: 158 FLQLFLEHYEVINRQTLDTA 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,761
Number of Sequences: 336
Number of extensions: 3870
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)