Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A15
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.14 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    25   0.72 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   1.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 173 CHFIFN*GFISRFIFHRRFLYILLPSFFWCCFLYFTILILSIC 45
           C + F   FI   IF    L++L    F+C F+ FT+ +L  C
Sbjct: 145 CIYYFYCAFI---IFTVHLLFLLCIYHFFCAFIIFTMHLLFCC 184



 Score = 24.6 bits (51), Expect = 0.96
 Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 113 YILLPSFFWCCFLYFTI-LILSICV 42
           ++L   +F+C F+ FT+ L+  +C+
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCI 166



 Score = 24.6 bits (51), Expect = 0.96
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -3

Query: 173 CHFIFN*GFISRFIFHRRFLYILLPSFFWCCFLYFTILILSICVTGSFPSAF 18
           C FI    F    +F   F++  +   F  C  YFT+ +L +     F SAF
Sbjct: 171 CAFII---FTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAF 219



 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 137 FIFHRRFLYILLPSFFWCCFLYFTILILSICV 42
           F  H  FL  +   +F+  F+ FTI +L  CV
Sbjct: 202 FTLHLLFLPCIY--YFYSAFIIFTIHLLFYCV 231


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = +3

Query: 9   KKTKRGRKAAGDTNG-----QDENGKIEETAPKKGRKKNVEE 119
           K++KR ++  GDTNG      D+N  +E +  +  +  + +E
Sbjct: 75  KRSKRSKRPNGDTNGDTSQVDDQNESLEASVNENSKNGDDDE 116


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 60  ENGKIEETAPKKGRKKNVEEPPVENKSTDEPSVEDEVAVSEENNPSED 203
           E  + +E +  +  ++  EE   E+K  D+P +ED     +E+   ED
Sbjct: 216 EKEREKELSDDEAEEEKKEEEG-EDKDKDKPKIEDVGEDEDEDTKKED 262


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +3

Query: 60  ENGKIEETAPKKGRKKNVEEPPVENKSTDEPSVEDEVAVSEENNPSEDGSETNGHIEEEQ 239
           ++ + E    K+ ++  ++E  +     ++ SV+ E+ + ++     DG + +G  EEE 
Sbjct: 35  DDARFETLVVKQTKQSVLDEARLR---ANDSSVDPEIDIEDKPAQKIDGEDDSGLTEEEV 91

Query: 240 VPS 248
           V S
Sbjct: 92  VLS 94


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = +3

Query: 324 KQEIEDEVEDKP 359
           K+E+++E+ED+P
Sbjct: 214 KKEVKEEIEDEP 225


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 14/58 (24%), Positives = 23/58 (39%)
 Frame = +3

Query: 45  TNGQDENGKIEETAPKKGRKKNVEEPPVENKSTDEPSVEDEVAVSEENNPSEDGSETN 218
           ++G D+ G  +E    K      +E       T+E S   ++  SEE +     S  N
Sbjct: 6   SSGGDDLGSTDEVKVFKDEGDGEDEKRSSENLTEEKSSLIDLTESEEKSGGSYSSNKN 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,342
Number of Sequences: 336
Number of extensions: 1842
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)