Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A14
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    25   0.99 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.2  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
 Frame = +3

Query: 615 SKWSN-WL----IPQSYEGRHWFSYVDK 683
           S W+  WL    +P  Y+G +W SY D+
Sbjct: 292 SDWTRVWLDDAQVPYKYDGTNWVSYDDE 319


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 485  DTFAQRACGGGRSLHRNL 432
            D F+ R CGG   L R+L
Sbjct: 970  DDFSNRCCGGSFPLLRSL 987


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 389 PAPDTVQVSERSPPHLCGG 333
           P+P   Q+ + SP   C G
Sbjct: 537 PSPPLSQIHDLSPDQFCNG 555


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,106
Number of Sequences: 336
Number of extensions: 4271
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)