Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A06
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   4.0  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   7.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.0  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 390 TSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVP 494
           ++T+ +S+     + PT   +S SC   P+M   P
Sbjct: 10  STTMATSSNAMSPMTPTYSMNSMSCVSMPSMNCSP 44


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 437  DEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 565
            D ++  +++C  +N+      A+Y Q  GK L SD+  D   H
Sbjct: 1818 DPKSEFKVVCYFTNW------AWYRQGVGKYLPSDIDPDLCTH 1854


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 102 LRFFCLTATHPTTQDRREFRN 40
           +R++C TAT    Q+  EF N
Sbjct: 291 MRWYCQTATMEEKQELYEFSN 311


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 4   WQSTRFAYGIFRISEFSPVLCGWVC 78
           W+S RF Y ++ I  F   + G  C
Sbjct: 63  WKSFRFVYAVYNI--FGAFVMGLFC 85


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
          protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 4  WQSTRFAYGIFRISEFSPVLC 66
          W + R   G F + +  P LC
Sbjct: 29 WSTYRLNNGKFTVEDIDPTLC 49


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
          protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 4  WQSTRFAYGIFRISEFSPVLC 66
          W + R+  G F +    P LC
Sbjct: 33 WSTYRWGNGRFTVDHIDPYLC 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,603
Number of Sequences: 336
Number of extensions: 3513
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)