Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10418
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 171 7e-44
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 109 3e-25
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 109 3e-25
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 109 5e-25
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 109 5e-25
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 68 1e-12
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 38 0.001
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 38 0.002
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 30 0.31
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 29 0.54
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 28 1.2
SPBC1A4.10c |pmc1|SPBP23A10.01c, med14|mediator complex subunit ... 25 8.8
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 171 bits (417), Expect = 7e-44
Identities = 82/91 (90%), Positives = 88/91 (96%)
Frame = +2
Query: 236 ESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 415
+S+ +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 416 KTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 87 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 117
Score = 171 bits (417), Expect = 7e-44
Identities = 82/91 (90%), Positives = 88/91 (96%)
Frame = +2
Query: 236 ESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 415
+S+ +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 416 KTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 193
Score = 171 bits (417), Expect = 7e-44
Identities = 82/91 (90%), Positives = 88/91 (96%)
Frame = +2
Query: 236 ESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 415
+S+ +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 416 KTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 269
Score = 171 bits (417), Expect = 7e-44
Identities = 82/91 (90%), Positives = 88/91 (96%)
Frame = +2
Query: 236 ESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 415
+S+ +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 416 KTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 345
Score = 171 bits (415), Expect = 1e-43
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +3
Query: 3 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 182
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 84
Query: 183 TGKTITLEVEASDTIENVKAKIQDKREFP 269
TGKTITLEVE+SDTI+NVK+KIQDK P
Sbjct: 85 TGKTITLEVESSDTIDNVKSKIQDKEGIP 113
Score = 171 bits (415), Expect = 1e-43
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +3
Query: 3 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 182
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 160
Query: 183 TGKTITLEVEASDTIENVKAKIQDKREFP 269
TGKTITLEVE+SDTI+NVK+KIQDK P
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIP 189
Score = 171 bits (415), Expect = 1e-43
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +3
Query: 3 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 182
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 177 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 236
Query: 183 TGKTITLEVEASDTIENVKAKIQDKREFP 269
TGKTITLEVE+SDTI+NVK+KIQDK P
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIP 265
Score = 171 bits (415), Expect = 1e-43
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +3
Query: 3 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 182
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312
Query: 183 TGKTITLEVEASDTIENVKAKIQDKREFP 269
TGKTITLEVE+SDTI+NVK+KIQDK P
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIP 341
Score = 163 bits (396), Expect = 2e-41
Identities = 80/97 (82%), Positives = 86/97 (88%)
Frame = +1
Query: 463 ESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 642
+S+ + G P LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 643 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIF G
Sbjct: 87 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 123
Score = 163 bits (396), Expect = 2e-41
Identities = 80/97 (82%), Positives = 86/97 (88%)
Frame = +1
Query: 463 ESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 642
+S+ + G P LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 643 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIF G
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 199
Score = 163 bits (396), Expect = 2e-41
Identities = 80/97 (82%), Positives = 86/97 (88%)
Frame = +1
Query: 463 ESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 642
+S+ + G P LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 643 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIF G
Sbjct: 239 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 275
Score = 163 bits (396), Expect = 2e-41
Identities = 80/97 (82%), Positives = 86/97 (88%)
Frame = +1
Query: 463 ESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 642
+S+ + G P LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 643 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIF G
Sbjct: 315 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 351
Score = 109 bits (263), Expect = 3e-25
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 3 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 161
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 94.7 bits (225), Expect = 1e-20
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = +2
Query: 236 ESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 388
+S+ +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 331 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 92.3 bits (219), Expect = 7e-20
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +1
Query: 613 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIF G
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 47
Score = 82.2 bits (194), Expect = 7e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +2
Query: 386 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 76.2 bits (179), Expect = 5e-15
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = +1
Query: 463 ESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 615
+S+ + G P LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 331 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 66.1 bits (154), Expect = 5e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 159 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKREFP 269
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDK P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 37
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 109 bits (263), Expect = 3e-25
Identities = 54/64 (84%), Positives = 58/64 (90%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKT 179
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKA 84
Query: 180 LTGK 191
L K
Sbjct: 85 LASK 88
Score = 94.7 bits (225), Expect = 1e-20
Identities = 47/62 (75%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 236 ESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 412
+S+ +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 413 GK 418
K
Sbjct: 87 SK 88
Score = 92.3 bits (219), Expect = 7e-20
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +1
Query: 613 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIF G
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 47
Score = 82.2 bits (194), Expect = 7e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +2
Query: 386 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 76.2 bits (179), Expect = 5e-15
Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 463 ESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 639
+S+ + G P LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 640 GK 645
K
Sbjct: 87 SK 88
Score = 66.1 bits (154), Expect = 5e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 159 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKREFP 269
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDK P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 37
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 109 bits (263), Expect = 3e-25
Identities = 54/64 (84%), Positives = 58/64 (90%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKT 179
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKA 84
Query: 180 LTGK 191
L K
Sbjct: 85 LASK 88
Score = 94.7 bits (225), Expect = 1e-20
Identities = 47/62 (75%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 236 ESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 412
+S+ +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 413 GK 418
K
Sbjct: 87 SK 88
Score = 92.3 bits (219), Expect = 7e-20
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +1
Query: 613 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIF G
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 47
Score = 82.2 bits (194), Expect = 7e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +2
Query: 386 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 76.2 bits (179), Expect = 5e-15
Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 463 ESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 639
+S+ + G P LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 640 GK 645
K
Sbjct: 87 SK 88
Score = 66.1 bits (154), Expect = 5e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 159 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKREFP 269
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDK P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 37
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 109 bits (261), Expect = 5e-25
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 3 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 158
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 93.9 bits (223), Expect = 2e-20
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +2
Query: 236 ESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 385
+S+ +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 92.3 bits (219), Expect = 7e-20
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +1
Query: 613 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIF G
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 47
Score = 82.2 bits (194), Expect = 7e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +2
Query: 386 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 75.4 bits (177), Expect = 8e-15
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = +1
Query: 463 ESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 612
+S+ + G P LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 66.1 bits (154), Expect = 5e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 159 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKREFP 269
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDK P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 37
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 109 bits (261), Expect = 5e-25
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 3 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 158
NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 25 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 93.9 bits (223), Expect = 2e-20
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +2
Query: 236 ESQDSGQEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 385
+S+ +EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 92.3 bits (219), Expect = 7e-20
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +1
Query: 613 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIF G
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 47
Score = 82.2 bits (194), Expect = 7e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +2
Query: 386 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 75.4 bits (177), Expect = 8e-15
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = +1
Query: 463 ESQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 612
+S+ + G P LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 66.1 bits (154), Expect = 5e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 159 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKREFP 269
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDK P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 37
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 68.1 bits (159), Expect = 1e-12
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +3
Query: 6 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 158
+K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 26 IKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 60.9 bits (141), Expect = 2e-10
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +1
Query: 613 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+ G
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAG 47
Score = 60.1 bits (139), Expect = 3e-10
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = +2
Query: 254 QEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 385
+EGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 33 KEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 52.0 bits (119), Expect = 9e-08
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +2
Query: 386 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 508
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQ
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQ 41
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +1
Query: 481 QRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 612
+ G P LI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 33 KEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 159 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKREFP 269
M I VKTLTGK I L+++ +D + +K ++++K P
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIP 37
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 38.3 bits (85), Expect = 0.001
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 185
+K I I ++QRLI+AG+ L+D +L Y IQ ++HLV L ++
Sbjct: 29 LKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTLGQNPAAAATNVS 88
Query: 186 GKT--ITLEVEASDTIENVKAKIQDKR 260
+T + ++A N A + R
Sbjct: 89 DRTQQVPTNIQAGQGANNPLANLTSAR 115
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 263 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 376
I ++QRLI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 39 IEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
Score = 30.7 bits (66), Expect = 0.23
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 511 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 603
LI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 46 LIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 37.5 bits (83), Expect = 0.002
Identities = 14/39 (35%), Positives = 29/39 (74%)
Frame = +3
Query: 6 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 122
+K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 27 LKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 30.3 bits (65), Expect = 0.31
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3
Query: 472 LGFHIFDGVRCFNFQCDGFTGKCFHKNLHSTS 377
L FDG + +N CD F GKCFHK +TS
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 245 LGFHIFYGVRCFNF*CDGFTGKCFHKDLHATT 150
L F G + +N CD F GKCFHK AT+
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 699 LGFHILNGVRCFNF*CDGFTGKCFHKDLHATT 604
L +G + +N CD F GKCFHK AT+
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 29.5 bits (63), Expect = 0.54
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 640 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFCG 753
GK LE+E ++T +K ++ +PP++Q++I G
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKG 47
Score = 28.7 bits (61), Expect = 0.94
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 413 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQD*FLRANSLK 538
GK LE+E ++T +K ++ +PP++Q ++ LK
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLK 51
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 466 SQDSGQRGNSPRSAGLIFAGKQLEDGRTLSDYNIQKESTLH 588
+ D GQ N+P I A +G TL+ YN LH
Sbjct: 117 NNDKGQPTNTPPVRSTIVAPSLYSEGSTLNHYNNGSHQVLH 157
>SPBC1A4.10c |pmc1|SPBP23A10.01c, med14|mediator complex subunit
Pmc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 879
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 530 CLPAKINPADLGEFPLCPESWLSHFR 453
CL ++N F L ESWL H R
Sbjct: 270 CLYQRLNLLSQQTFQLSRESWLGHLR 295
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,329,644
Number of Sequences: 5004
Number of extensions: 71356
Number of successful extensions: 258
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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