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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0204.Seq
         (797 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar...    31   0.25 
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac...    29   0.77 
SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom...    28   1.3  
SPAC343.14c |||translation initiation factor eIF2B|Schizosacchar...    27   2.4  
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy...    27   3.1  
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo...    27   4.1  
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    26   5.4  
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ...    26   7.2  
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ...    25   9.5  

>SPBC28E12.03 |rga4||GTPase activating protein
           Rga4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 933

 Score = 30.7 bits (66), Expect = 0.25
 Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
 Frame = +2

Query: 425 CSRCLQMINENNKIEIDKQAFHSHCAKCIFATRFHRPTSTSAMVKSSASLASNITSCTDI 604
           C +C + +   +++    + +HS C KC+   +   P+S          +   +  C DI
Sbjct: 24  CIKCWESVPSTSQVWFGGKCWHSDCFKCVNCNKKLDPSSEDFSQDDQKQIFCKL--CVDI 81

Query: 605 ---RTTPMNFFQAMLSSXSRXP 661
               +TP+  F A+ +S +  P
Sbjct: 82  CNGCSTPICEFNAVSNSQANHP 103


>SPCC736.14 |dis1||microtubule-associated protein Dis1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 882

 Score = 29.1 bits (62), Expect = 0.77
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 309 STQTGPSGL-VESLEMVRRGIILEQAANQRPLKGILNAASALDAFK*STRITKLKLTSRP 485
           S+ T PS   + S  +V R       A     KG+ NAAS+  +F  S  I+K   TSR 
Sbjct: 589 SSPTKPSTTSLRSQSLVNRFASSTLKAPSSSSKGVSNAASSKQSFPSSPSISKKLETSRL 648

Query: 486 SIVTVPSAFLPHGSIVQ 536
           S   +P + +   S ++
Sbjct: 649 STKKLPGSTMKAASALK 665


>SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 687

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 562 FCEPCFQHHVLHRHKDNPN 618
           FC PC +   LH HKDNPN
Sbjct: 17  FCGPCRR---LHYHKDNPN 32


>SPAC343.14c |||translation initiation factor
           eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 393

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 48  HTYPKKSSLIMDKGQEQVKKPF 113
           HTYP  SSLI D    +V+ PF
Sbjct: 8   HTYPAVSSLIADLKSRKVQGPF 29


>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 355

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 632 LERNSLGLSLCRCKT*CWKQGSQKT 558
           LERN +  S CR K   W Q  +KT
Sbjct: 274 LERNRIAASKCRQKKKLWTQNLEKT 298


>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
           Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 783

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +2

Query: 365 DNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA 484
           D+P  +S  E+ EG+ + S+ S    +++++   E +KQA
Sbjct: 557 DSPNVASGVESDEGSEEISLDSEYSDILSDDGDFEKEKQA 596


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 533 PTSTSAMVKSSASLASNITSCTDIRTTP 616
           P STS+   SS+ L S  TSCT   + P
Sbjct: 319 PASTSSTGTSSSPLPSTSTSCTTSTSIP 346



 Score = 26.2 bits (55), Expect = 5.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 533 PTSTSAMVKSSASLASNITSCTDIRTTP 616
           P STS+   SS+ L S  TSCT   + P
Sbjct: 373 PASTSSTGTSSSPLLSTSTSCTTSTSIP 400



 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 533 PTSTSAMVKSSASLASNITSCTDIRTTP 616
           PTSTS+   +S+ L +  TSCT   + P
Sbjct: 209 PTSTSSTDTNSSPLPTTSTSCTTSTSIP 236



 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 533 PTSTSAMVKSSASLASNITSCTDIRTTP 616
           PTSTS+   +S+ L +  TSCT   + P
Sbjct: 265 PTSTSSTDTNSSPLPTTSTSCTTSTSIP 292


>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
           zf-fungal binuclear cluster type |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 977

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 482 AFHSHCAKCIFATRFHRPTSTSAMVKSSASLASNITSCTDIRTTPMN 622
           A+H H    +F +      +  + + SS SLA N  S + +  TP+N
Sbjct: 710 AYH-HTLMWLFRSIGETENNQLSKISSSVSLAGNTVSFSPVSHTPIN 755


>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 557

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 350 NGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENN 460
           +G + D+  ASS+S AS G   RSV  R   +  E++
Sbjct: 517 DGADNDDSSASSESFASAGAHSRSVFPRRSNVSEESH 553


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,190,819
Number of Sequences: 5004
Number of extensions: 65492
Number of successful extensions: 187
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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