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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0004
         (520 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar...   109   2e-25
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ...    63   3e-11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha...    50   2e-07
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil...    40   2e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c...    38   7e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz...    33   0.019
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy...    33   0.034
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo...    31   0.078
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce...    29   0.55 
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats...    28   0.96 
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo...    28   0.96 
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po...    26   2.9  
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc...    26   3.9  
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch...    25   5.1  
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch...    25   9.0  
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo...    25   9.0  

>SPBC530.10c |anc1||adenine nucleotide carrier
           Anc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score =  109 bits (263), Expect = 2e-25
 Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = +3

Query: 255 GISAAVSKTAVXPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 431
           G+SAAVSKTA  PIERVKLL+Q Q  + +      RYKGI + F R   E+G++S WRGN
Sbjct: 35  GVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGN 94

Query: 432 FANVIRYFPTQALNFAFKDKYKQVF 506
            ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 95  TANVLRYFPTQALNFAFKDKFKKMF 119



 Score = 32.7 bits (71), Expect = 0.034
 Identities = 21/89 (23%), Positives = 38/89 (42%)
 Frame = +3

Query: 243 LPGWGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 422
           L   G + A S   V  ++  +  L     S +   ++++ G+VD + +  +  GL   +
Sbjct: 136 LASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLY 195

Query: 423 RGNFANVIRYFPTQALNFAFKDKYKQVFL 509
           RG   +V+     + L F   D  K V L
Sbjct: 196 RGFGPSVVGIVVYRGLYFGMYDTLKPVVL 224


>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 62.9 bits (146), Expect = 3e-11
 Identities = 32/82 (39%), Positives = 50/82 (60%)
 Frame = +3

Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 434
           G++A VS+TAV P+ER+K++ QVQ+       ++ Y  +    V+I   +GL+ F+RGN 
Sbjct: 28  GVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNG 80

Query: 435 ANVIRYFPTQALNFAFKDKYKQ 500
            N +R FP  A+ FA  +  KQ
Sbjct: 81  TNCLRAFPYGAVQFATFNMLKQ 102



 Score = 34.7 bits (76), Expect = 0.008
 Identities = 17/74 (22%), Positives = 34/74 (45%)
 Frame = +3

Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 434
           G +  + +T   P + ++   QV  +         YK I  A   I K +G+  F+RG  
Sbjct: 234 GFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYS 290

Query: 435 ANVIRYFPTQALNF 476
           +N+++  P  ++ +
Sbjct: 291 SNMLKIIPVMSITW 304


>SPAC17H9.08 |||mitochondrial coenzyme A
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 326

 Score = 50.0 bits (114), Expect = 2e-07
 Identities = 29/93 (31%), Positives = 50/93 (53%)
 Frame = +3

Query: 231 VR*GLPGWGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 410
           V+ G+ G G +  V+K+ V P++RVK+L Q  H S +  A  R+ G+  A   I    GL
Sbjct: 18  VKSGIAG-GTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGL 75

Query: 411 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 509
              ++G+ A + R FP   + F   ++ ++V +
Sbjct: 76  HGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLI 108


>SPBC12D12.05c |||mitochondrial carrier, calcium binding
           subfamily|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 426

 Score = 39.9 bits (89), Expect = 2e-04
 Identities = 20/81 (24%), Positives = 39/81 (48%)
 Frame = +3

Query: 258 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 437
           +S +   T V P+  ++  LQ Q  S   A    Y G +D F +  K +G    ++G   
Sbjct: 344 LSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSP 400

Query: 438 NVIRYFPTQALNFAFKDKYKQ 500
           N+++  P+ A+++   +  K+
Sbjct: 401 NLLKVAPSVAISYLVYENCKK 421



 Score = 30.7 bits (66), Expect = 0.14
 Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
 Frame = +3

Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGN 431
           G++ +V++  + P++ +K  +Q   +S+     Q  K I+ +  + + K  G+  ++RG 
Sbjct: 236 GMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGV 291

Query: 432 FANVIRYFPTQALNFAFKDKYKQVFLAAL 518
              ++  FP  A +    +  K+ ++  L
Sbjct: 292 LVGILGMFPYSATDLGTFEGLKRTWIGIL 320


>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 303

 Score = 38.3 bits (85), Expect = 7e-04
 Identities = 23/85 (27%), Positives = 45/85 (52%)
 Frame = +3

Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 434
           G+S A++ +   P++ VK LLQ +  S  I   ++ KG +D    I    G+ SF++G  
Sbjct: 212 GLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGIR 270

Query: 435 ANVIRYFPTQALNFAFKDKYKQVFL 509
             ++   P  A+++A  +  K++ +
Sbjct: 271 PRMVVAMPATAVSWAAYEAGKEILI 295


>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 298

 Score = 33.5 bits (73), Expect = 0.019
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +3

Query: 255 GISAAVSKT-AVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 431
           G  A +S+   + P++ VK  +Q+  V K       Y G  D   +I K +G    +RG 
Sbjct: 15  GAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVKNEGPHRLYRGI 68

Query: 432 FANVIRYFPTQALNFAFKDKYKQVF 506
              ++   P +AL FA  D Y +++
Sbjct: 69  LPPILMEAPKRALKFASNDTYSKLW 93



 Score = 31.9 bits (69), Expect = 0.059
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
 Frame = +3

Query: 255 GISAAVSKT-AVXPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 428
           G  A  ++T  V P E +K+ LQ V++ SK       Y G VD F +I K++ +L+ + G
Sbjct: 111 GSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNG 163

Query: 429 NFANVIRYFPTQALNFAFKDKYK 497
             A + R+    A  F    K +
Sbjct: 164 FEATMWRHVVWNAGYFGVIQKIR 186


>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 361

 Score = 32.7 bits (71), Expect = 0.034
 Identities = 21/78 (26%), Positives = 37/78 (47%)
 Frame = +3

Query: 243 LPGWGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 422
           L G GI+  ++     P E V+  L+    S  I    +Y G++  F  +  EQG++  +
Sbjct: 276 LGGAGIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLY 332

Query: 423 RGNFANVIRYFPTQALNF 476
            G  A+++R  P   + F
Sbjct: 333 GGLTAHLLRVVPNACILF 350


>SPAC19G12.05 |||mitochondrial citrate
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 291

 Score = 31.5 bits (68), Expect = 0.078
 Identities = 18/82 (21%), Positives = 36/82 (43%)
 Frame = +3

Query: 258 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 437
           ++  ++     PI+ VK  +Q       ++A + YK  +    +I  + GLL FW G   
Sbjct: 212 VAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATP 265

Query: 438 NVIRYFPTQALNFAFKDKYKQV 503
            + R   +  + F   +K  ++
Sbjct: 266 RLARLILSGGIVFTVYEKVMEI 287


>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 371

 Score = 28.7 bits (61), Expect = 0.55
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 345 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 443
           A    Y    DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257



 Score = 27.1 bits (57), Expect = 1.7
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
 Frame = +3

Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWR 425
           G +   S   V P++ VK   Q Q         +      G + +   I   +G+   +R
Sbjct: 13  GAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYR 72

Query: 426 GNFANVIRYFPTQALNFAFKDKYKQVF 506
           G    ++ Y P+ ++ F   +K K +F
Sbjct: 73  GVGPMMLGYLPSWSIYFVVYEKCKVLF 99


>SPAC4G9.20c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 302

 Score = 27.9 bits (59), Expect = 0.96
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +3

Query: 243 LPGWGISAAVSKTA----VXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 410
           +P + +S A+S  A    V P+E V++ LQ+Q   K +     Y G  D   +I  + GL
Sbjct: 112 MPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGL 166

Query: 411 LSFWRG 428
               +G
Sbjct: 167 SGIMKG 172


>SPBC1604.04 |||thiamine pyrophosphate
           transporter|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 314

 Score = 27.9 bits (59), Expect = 0.96
 Identities = 18/83 (21%), Positives = 35/83 (42%)
 Frame = +3

Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 434
           GIS+ + +  + P + +K+ +Q+   S +             F    +++G+ + WRGN 
Sbjct: 24  GISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEGVRALWRGNV 72

Query: 435 ANVIRYFPTQALNFAFKDKYKQV 503
              + Y    A  F    K K +
Sbjct: 73  VAELLYLVYGAAEFVAFSKLKHL 95



 Score = 25.8 bits (54), Expect = 3.9
 Identities = 17/67 (25%), Positives = 29/67 (43%)
 Frame = +3

Query: 258 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 437
           I+ A SK  + P++ V   LQ             YK   D F+ I +  G+   +RG   
Sbjct: 201 IAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYRGLSV 252

Query: 438 NVIRYFP 458
           ++++  P
Sbjct: 253 SMLKVAP 259


>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 897

 Score = 26.2 bits (55), Expect = 2.9
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 81  YEITPNLLFKNQELVFRDPPSACAATPTSTY 173
           YE+  N  F N       PP AC+   TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392


>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1072

 Score = 25.8 bits (54), Expect = 3.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 385 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGXTAV 278
           T+ + + +  WSA I +LT C    SLT S+  T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568


>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 271

 Score = 25.4 bits (53), Expect = 5.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 369 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 461
           +++    + + +GL  F+RG +  V  Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149


>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
           Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 148

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 93  PNLLFKNQELVFRDPPSACAATPT 164
           P  + K  E + RDPP    A PT
Sbjct: 4   PKRIIKEIETLTRDPPPGIVAAPT 27


>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
           3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 925

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 61  TLC--APVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHIHLV 183
           T+C  AP +  L  ++C+K+   C  +  PR     PR+ HL+
Sbjct: 551 TICNIAPFVENLSFVTCAKLMQLCSSLSSPRFLFRNPRN-HLL 592


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,946,353
Number of Sequences: 5004
Number of extensions: 37657
Number of successful extensions: 116
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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