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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0045.Seq
         (677 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch...    42   8e-05
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo...    40   3e-04
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ...    32   0.066
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch...    32   0.066
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc...    32   0.088
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe...    31   0.15 
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr...    30   0.35 
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ...    29   0.47 
SPCC11E10.04 |||mitochondrial ATPase expression protein homolog|...    29   0.82 
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|...    28   1.1  
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...    28   1.4  
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei...    28   1.4  
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|...    27   1.9  
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos...    27   2.5  
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr...    27   3.3  
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa...    27   3.3  
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc...    27   3.3  
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr...    26   4.4  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        26   5.8  
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce...    25   7.6  
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo...    25   7.6  

>SPCC663.03 |pmd1||leptomycin efflux transporter
            Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1362

 Score = 41.9 bits (94), Expect = 8e-05
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
 Frame = -2

Query: 493  RNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVID--ERVNWAAQILGL----REYLK 332
            + IA+V Q   LY   TV +N+  G       +E+I+  ++ N    ILGL         
Sbjct: 1195 KQIALVSQEPTLYQG-TVRENIVLGASKDVSEEEMIEACKKANIHEFILGLPNGYNTLCG 1253

Query: 331  RKPGALSGGQRQRVALGRAIVR 266
            +K  +LSGGQ+QR+A+ RA++R
Sbjct: 1254 QKGSSLSGGQKQRIAIARALIR 1275



 Score = 37.1 bits (82), Expect = 0.002
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 15/95 (15%)
 Frame = -2

Query: 502 AKARN-IAMVFQNYALYPHMTVYDNMAFGLK---MQKIAKEVIDERVNWAAQILGLREYL 335
           A  RN I++V Q   L+   TV++N+ +GL       ++KE ++ RV  AA++    +++
Sbjct: 492 ASLRNQISLVQQEPVLFA-TTVFENITYGLPDTIKGTLSKEELERRVYDAAKLANAYDFI 550

Query: 334 KRKPGA-----------LSGGQRQRVALGRAIVRE 263
              P             +SGGQ+QR+A+ RA++ +
Sbjct: 551 MTLPEQFSTNVGQRGFLMSGGQKQRIAIARAVISD 585



 Score = 34.7 bits (76), Expect = 0.012
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -1

Query: 653  GLQLEIADKEFIVFVARSGCGKSTT 579
            GL L +   +F+ FV  SGCGKSTT
Sbjct: 1139 GLNLTVKPGQFVAFVGSSGCGKSTT 1163


>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1336

 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = -1

Query: 287  AWAGDCTRSGRFL-MDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMAT 111
            A+A    R+ R L +DE  S LD+K  + +   I    Q L+ T++ +TH Q   M +A 
Sbjct: 1245 AFARALLRNPRLLILDECTSALDSKSSLLLEKTI----QNLSCTVLIITH-QPSLMKLAD 1299

Query: 110  RIVIMKDGIVQQVGAPKTVYNQ 45
            RI++M  GIV++ G+   + N+
Sbjct: 1300 RIIVMDSGIVKESGSFDELMNR 1321



 Score = 33.1 bits (72), Expect = 0.038
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -2

Query: 328 KPGALSGGQRQRVALGRAIVREAGV 254
           K  +LSGGQ+QR+AL RA++R+  +
Sbjct: 567 KEASLSGGQQQRIALARALLRDTEI 591


>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1427

 Score = 32.3 bits (70), Expect = 0.066
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 340 YLKRKPGALSGGQRQRVALGRAIVREAGVF 251
           Y+     +LSGGQ+QRV+L RA+   A V+
Sbjct: 699 YIHSNGSSLSGGQKQRVSLARALYSNAEVY 728



 Score = 29.5 bits (63), Expect = 0.47
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 656  EGLQLEIADKEFIVFVARSGCGKST 582
            E + LEI  KE I  V R+G GKST
Sbjct: 1198 EDINLEILPKEKIAIVGRTGSGKST 1222


>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
           ATPase|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 726

 Score = 32.3 bits (70), Expect = 0.066
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
 Frame = -2

Query: 445 TVYDNMAFGLKMQKIAKEVID--ERVNWAAQILGLREYLKRKPGA----LSGGQRQRVAL 284
           T+ +N+A+G K     +E+ D  +R N  + +L   E    + G     LSGGQ+QR+A+
Sbjct: 573 TIGENIAYG-KSNASQEEIEDAAKRAN-CSFVLSFPEKWSTQVGTRGLQLSGGQKQRIAI 630

Query: 283 GRAIVR 266
            RA++R
Sbjct: 631 ARALLR 636


>SPCP1E11.04c |pal1||membrane associated protein Pal1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 425

 Score = 31.9 bits (69), Expect = 0.088
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 506 NSFIRLPSINRSPPLISSSPAIMRRWSTYRSPNGRQTR 619
           NS IR   +NRS  ++S +P  + R S YRS +   TR
Sbjct: 300 NSLIRKLGLNRSASMMSRTPNTLNRPSNYRSHSSMGTR 337


>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1465

 Score = 31.1 bits (67), Expect = 0.15
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 331 RKPGALSGGQRQRVALGRAIVREAGVF 251
           +K  +LSGGQ+ R++L RAI  +A ++
Sbjct: 699 QKGASLSGGQKSRISLARAIYSQADIY 725



 Score = 25.8 bits (54), Expect = 5.8
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 650  LQLEIADKEFIVFVARSGCGKST 582
            + +EI+ +E I  V R+G GKST
Sbjct: 1246 INIEISPREKIGIVGRTGAGKST 1268


>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 593

 Score = 29.9 bits (64), Expect = 0.35
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -1

Query: 254 FLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMK 93
           +L+DEP + LD++ R+     I +       T   V HD   A  +A R+++ +
Sbjct: 477 YLIDEPSAYLDSEQRIIASKVIRRFIVNSRKTAFIVEHDFIMATYLADRVILFE 530


>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
           membrane transporter Hmt1|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 830

 Score = 29.5 bits (63), Expect = 0.47
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = -2

Query: 316 LSGGQRQRVALGRAIVREAGV 254
           LSGG++QRVA+ RAI+++  +
Sbjct: 721 LSGGEKQRVAVARAILKDPSI 741


>SPCC11E10.04 |||mitochondrial ATPase expression protein
           homolog|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 443

 Score = 28.7 bits (61), Expect = 0.82
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 487 IAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVID 383
           I + F NY L P+ T YD +  GL      +E+ D
Sbjct: 208 IEVDFPNYDLVPNSTTYDYLMVGLSRDGKIREIYD 242


>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
           Abc4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1469

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -2

Query: 316 LSGGQRQRVALGRAI 272
           LSGGQ+QR+AL RA+
Sbjct: 740 LSGGQKQRIALARAV 754


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = -2

Query: 478 VFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLR 344
           +++N  L    T++ N  FG ++Q+  K ++DER++ +  + G +
Sbjct: 326 LYKNIVLSGGSTLFKN--FGNRLQRDLKRIVDERIHRSEMLSGAK 368


>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
           Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 327

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +1

Query: 199 RICTRSLASRLESGSSIKKRPLRVQSPAQAPLADVARRKAPPAYVSGTHAGREFAPPS 372
           +IC ++L  RLE+ SS  K+ L       + L ++ R +APP+Y    +    + P S
Sbjct: 268 QIC-QTLRKRLENDSSTTKQRL-------SKLEEIIRNRAPPSYSFSLNCSHTYQPVS 317


>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
           5|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 736

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +2

Query: 464 VILEHHRY--IACFGWNSFIRLPSI 532
           V+ E+HR+  I C G+N F+ LP +
Sbjct: 587 VVTENHRWLHIVCEGFNCFLELPEV 611


>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
            Rad50|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1290

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = -1

Query: 260  GRFLMDEPLSNLDAKLRVQMRAEISKL----HQKLNTTMIYVTHDQ 135
            G   +DEP +NLD +    +   +S++     ++ N  +I +THD+
Sbjct: 1207 GILALDEPTTNLDEENICSLAKNLSRIVEFRRKQANFQLIVITHDE 1252


>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 172

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -1

Query: 509 SSSQSTQYSDGVPELRVVSAYDGLRQHGVWSEDAKNRQRGD 387
           +S   + YS+ VPE    SA          SE+AKN  +GD
Sbjct: 98  TSVPQSSYSNSVPEAAYGSAPPSTFASSAISEEAKNACKGD 138


>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 618

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 355 LGLREYLKRKPGA-LSGGQRQRVALGRAI 272
           LG  + +  KP   +SGG R RVAL RA+
Sbjct: 207 LGFTQEMMAKPTKDMSGGWRMRVALSRAL 235


>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
           Abc2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1463

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
           +LSGGQ+ R++L RA+   + ++
Sbjct: 705 SLSGGQKARISLARAVYSRSDIY 727


>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 904

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 673 NQVHVVKDFNWKLPIKSSSCLSPVRAAV 590
           N V +  DF+ KL + SSS L+ VR A+
Sbjct: 630 NNVSIPDDFDSKLKLSSSSGLTCVRIAI 657


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 629  KEFIVFVARSGCGKSTTC 576
            KE ++ V  +GCGK+T C
Sbjct: 1186 KEPVLLVGDTGCGKTTVC 1203


>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
          pombe|chr 1|||Manual
          Length = 674

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 3  RW*SNKSGNKHIRGLVI 53
          RW SN SGN+ ++G VI
Sbjct: 37 RWNSNASGNEKVKGPVI 53


>SPAC22F3.12c |rgs1||regulator of G-protein signaling
           Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 481

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +1

Query: 379 AHQSPLWRFFASSDQTPCCRKPS--YADTTRNSGTPSLYCVL--WLELIHSFAVDQQIAA 546
           AH   ++  F SS+       PS  Y   T +         L  WL+LIH   ++ Q A 
Sbjct: 401 AHACGIYNCFLSSNAPNAVNLPSDLYEKITNHMALAMEVEPLNEWLQLIHILLLEAQTAV 460

Query: 547 ADLL 558
            DL+
Sbjct: 461 LDLM 464


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,793,495
Number of Sequences: 5004
Number of extensions: 57962
Number of successful extensions: 213
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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