BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= pg--0031.Seq (734 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 140 1e-34 SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 133 3e-32 SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 118 1e-27 SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 116 3e-27 SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 99 3e-22 SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 55 9e-09 SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 46 6e-06 SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 31 0.17 SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.23 SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.91 SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 6.4 SPAC2F3.04c |rim1||mitochondrial single-stranded DNA binding pro... 26 6.4 SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces pomb... 25 8.5 SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 8.5 SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 8.5 SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 8.5 >SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces pombe|chr 3|||Manual Length = 647 Score = 140 bits (340), Expect = 1e-34 Identities = 65/97 (67%), Positives = 77/97 (79%) Frame = +3 Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 419 P FDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSM Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120 Query: 420 VLTKMKETAEAYLGKTVQNAVITVPAYFNDLKDKPQK 530 VL KM+ETAEAYLG V +AV+TVPAYFND + + K Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATK 157 Score = 121 bits (291), Expect = 1e-28 Identities = 58/67 (86%), Positives = 62/67 (92%) Frame = +2 Query: 509 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTI 688 SQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTI Sbjct: 151 SQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTI 210 Query: 689 EDGIFEV 709 E+GIFEV Sbjct: 211 EEGIFEV 217 Score = 118 bits (285), Expect = 7e-28 Identities = 54/62 (87%), Positives = 59/62 (95%) Frame = +1 Query: 70 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 249 ++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63 Query: 250 TI 255 TI Sbjct: 64 TI 65 >SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces pombe|chr 1|||Manual Length = 644 Score = 133 bits (321), Expect = 3e-32 Identities = 61/97 (62%), Positives = 75/97 (77%) Frame = +3 Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 419 P FDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSM Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120 Query: 420 VLTKMKETAEAYLGKTVQNAVITVPAYFNDLKDKPQK 530 VL KM+E+AEA+LG V +AV+TVPAYFND + + K Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATK 157 Score = 118 bits (285), Expect = 7e-28 Identities = 54/62 (87%), Positives = 59/62 (95%) Frame = +1 Query: 70 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 249 ++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63 Query: 250 TI 255 TI Sbjct: 64 TI 65 Score = 118 bits (283), Expect = 1e-27 Identities = 57/67 (85%), Positives = 61/67 (91%) Frame = +2 Query: 509 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTI 688 SQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTI Sbjct: 151 SQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTI 210 Query: 689 EDGIFEV 709 E+GIFEV Sbjct: 211 EEGIFEV 217 >SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces pombe|chr 2|||Manual Length = 613 Score = 118 bits (283), Expect = 1e-27 Identities = 54/90 (60%), Positives = 68/90 (75%) Frame = +3 Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 419 P+ FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+M Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124 Query: 420 VLTKMKETAEAYLGKTVQNAVITVPAYFND 509 VLTKMKE +EA L K V+ AVITVPAYF+D Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPAYFSD 154 Score = 110 bits (264), Expect = 2e-25 Identities = 53/67 (79%), Positives = 58/67 (86%) Frame = +2 Query: 509 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTI 688 SQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L I Sbjct: 155 SQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKI 214 Query: 689 EDGIFEV 709 + G+FEV Sbjct: 215 QGGVFEV 221 Score = 105 bits (253), Expect = 5e-24 Identities = 47/62 (75%), Positives = 54/62 (87%) Frame = +1 Query: 70 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 249 A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67 Query: 250 TI 255 T+ Sbjct: 68 TV 69 >SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual Length = 663 Score = 116 bits (279), Expect = 3e-27 Identities = 52/97 (53%), Positives = 73/97 (75%) Frame = +3 Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 419 P+ FD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153 Query: 420 VLTKMKETAEAYLGKTVQNAVITVPAYFNDLKDKPQK 530 +L+KMK+TAEAYLGK V +AV+TVPAYFND + + K Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATK 190 Score = 109 bits (262), Expect = 4e-25 Identities = 49/67 (73%), Positives = 64/67 (95%) Frame = +2 Query: 509 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTI 688 +QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+I Sbjct: 184 AQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSI 242 Query: 689 EDGIFEV 709 ++G+FEV Sbjct: 243 DNGVFEV 249 Score = 104 bits (249), Expect = 2e-23 Identities = 46/61 (75%), Positives = 53/61 (86%) Frame = +1 Query: 73 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 252 +GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97 Query: 253 I 255 I Sbjct: 98 I 98 >SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces pombe|chr 1|||Manual Length = 674 Score = 99 bits (238), Expect = 3e-22 Identities = 47/67 (70%), Positives = 57/67 (85%) Frame = +2 Query: 509 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTI 688 SQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL + Sbjct: 197 SQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTFDISILEL 254 Query: 689 EDGIFEV 709 +G+FEV Sbjct: 255 NNGVFEV 261 Score = 86.2 bits (204), Expect = 4e-18 Identities = 41/97 (42%), Positives = 60/97 (61%) Frame = +3 Query: 240 PQQHNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 419 P+ F KRLIGR+F++ VQ D+K P+++V + KT+ P ++ Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166 Query: 420 VLTKMKETAEAYLGKTVQNAVITVPAYFNDLKDKPQK 530 +L+KM+ETA YLGK V+NAV+TVPAYFND + + K Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATK 203 Score = 77.4 bits (182), Expect = 2e-15 Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Frame = +1 Query: 61 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 237 K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q + Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108 Query: 238 NPNNT 252 NP NT Sbjct: 109 NPENT 113 >SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 55.2 bits (127), Expect = 9e-09 Identities = 23/66 (34%), Positives = 42/66 (63%) Frame = +1 Query: 58 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 237 ++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62 Query: 238 NPNNTI 255 N NT+ Sbjct: 63 NFRNTV 68 Score = 51.2 bits (117), Expect = 1e-07 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Frame = +2 Query: 512 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVSI 679 QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G + VSI Sbjct: 156 QRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSI 215 Query: 680 LTIEDGIFEV 709 + G F + Sbjct: 216 VEFSRGQFHI 225 Score = 44.8 bits (101), Expect = 1e-05 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +3 Query: 264 KRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 440 KRL GR ++D ++ + ++ G KV Y E+ F ++ + TK+K Sbjct: 72 KRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKA 131 Query: 441 TAEAYLGKTVQNAVITVPAYFNDLK 515 AEA L +V + VI++PA+F D++ Sbjct: 132 IAEAELIGSVSDVVISIPAWFTDIQ 156 >SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pombe|chr 1|||Manual Length = 566 Score = 46.0 bits (104), Expect = 6e-06 Identities = 18/62 (29%), Positives = 36/62 (58%) Frame = +1 Query: 73 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 252 +GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+ Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86 Query: 253 IS 258 ++ Sbjct: 87 VT 88 Score = 36.3 bits (80), Expect = 0.005 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +3 Query: 381 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDLKDK 521 ++K E S L ++ E+AE +LG V V++VP YF D + K Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRK 180 >SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 31.1 bits (67), Expect = 0.17 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = +1 Query: 73 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 249 + ID GT ++ + + G +EI+ R S VAF ER+ G A N P + Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84 Query: 250 TI 255 +I Sbjct: 85 SI 86 Score = 29.5 bits (63), Expect = 0.52 Identities = 12/45 (26%), Positives = 26/45 (57%) Frame = +3 Query: 381 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDLK 515 +++ + EE+ +M + AE + + + V+TVP +FN+L+ Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQ 175 >SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1236 Score = 30.7 bits (66), Expect = 0.23 Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 11/154 (7%) Frame = -2 Query: 661 TAAEVKDKYISFSSTLFVKTVSNRSSSGFIDDSENVQA*DGTCIFCGLSLRSLKYAGTVI 482 +++ + + S SS L T S S+S I S + F S S + I Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSASTSSPSSISSSI 618 Query: 481 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPL-----------YATLILGLPPSLT 335 ++ T+L + S + +S+ + S +LSS + Y++ ++ +L Sbjct: 619 SSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLV 678 Query: 334 TSKGQCFMSACTVASSNLRPMRRLASKLCCWGSS 233 +S +S+ VASS+ P+ +S + + +S Sbjct: 679 SSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSAS 712 >SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosaccharomyces pombe|chr 1|||Manual Length = 378 Score = 28.7 bits (61), Expect = 0.91 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 65 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 160 HP S W+P LVS+ W +SP+++ T Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314 >SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||Manual Length = 3971 Score = 25.8 bits (54), Expect = 6.4 Identities = 23/111 (20%), Positives = 49/111 (44%) Frame = -2 Query: 661 TAAEVKDKYISFSSTLFVKTVSNRSSSGFIDDSENVQA*DGTCIFCGLSLRSLKYAGTVI 482 T++ V + +S+ V T + +SS ++ S + + ++ S+ + T I Sbjct: 1549 TSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 1608 Query: 481 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTS 329 T+ + S + S+ +TSS S+P+ ++ L P +T+S Sbjct: 1609 TSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSS 1659 >SPAC2F3.04c |rim1||mitochondrial single-stranded DNA binding protein Rim1|Schizosaccharomyces pombe|chr 1|||Manual Length = 150 Score = 25.8 bits (54), Expect = 6.4 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = +3 Query: 249 HNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFP 401 +NFD + I RK V+AD ++G + K+ + + D F+P Sbjct: 75 YNFDRLQTILRKGTRVYVEADAVWRSVPAGNEGSQAKMSLRHVSADVLFYP 125 >SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 281 Score = 25.4 bits (53), Expect = 8.5 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 5/73 (6%) Frame = -1 Query: 392 GFVFTLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGIEIVLLGFI-----AT 228 GFVFT + I + + P+L V L S FE FG V+LG Sbjct: 104 GFVFTYLA------EQIVQDAKLPLLTVNLKSWKFEPPWPAIFGFVAVILGLSYRRMDTK 157 Query: 227 WFLAASPMRRSVS 189 + L A+P+R S S Sbjct: 158 YPLGAAPLRPSQS 170 >SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Schizosaccharomyces pombe|chr 1|||Manual Length = 1995 Score = 25.4 bits (53), Expect = 8.5 Identities = 16/59 (27%), Positives = 23/59 (38%) Frame = +3 Query: 249 HNFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 425 H F L G K E T K WP+ ++ ++G +TF EV +L Sbjct: 1263 HRFYEYLLSGNKDEALTYALQQKQWPYAIIV--AHSIDAKTFQGVVRTFCKSEVKESML 1319 >SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1087 Score = 25.4 bits (53), Expect = 8.5 Identities = 17/66 (25%), Positives = 31/66 (46%) Frame = +3 Query: 51 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 230 +NGK T +R +S + W P++E R G D + V R + + +EP Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531 Query: 231 GDEPQQ 248 ++P++ Sbjct: 532 -EKPEE 536 >SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosaccharomyces pombe|chr 1|||Manual Length = 411 Score = 25.4 bits (53), Expect = 8.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -2 Query: 151 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 47 G W SP S + H ++++ +F +RVL C+ Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,233,461 Number of Sequences: 5004 Number of extensions: 69610 Number of successful extensions: 284 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 238 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 279 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 347244562 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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