Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00033
(763 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 158 7e-40
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 158 9e-40
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 128 6e-31
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 103 2e-23
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 93 5e-20
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 38 0.002
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 34 0.025
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 29 0.55
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 29 0.96
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.96
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 29 0.96
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 28 1.3
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 27 2.2
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 2.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 2.2
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.9
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 27 3.9
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.9
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 3.9
SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 3.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 3.9
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 5.1
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 26 5.1
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.1
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 26 6.7
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 26 6.7
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 26 6.7
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 8.9
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 25 8.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 158 bits (384), Expect = 7e-40
Identities = 75/84 (89%), Positives = 78/84 (92%)
Frame = +2
Query: 2 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 181
YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA
Sbjct: 429 YSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSA 488
Query: 182 IEKSTNKENKITITNDKGRLSKEE 253
+EK T K KITITNDKGRLSKEE
Sbjct: 489 LEKGTGKTQKITITNDKGRLSKEE 512
Score = 99.5 bits (237), Expect = 5e-22
Identities = 45/86 (52%), Positives = 64/86 (74%)
Frame = +1
Query: 256 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSILSTMEDXKLKEKISDSDKQTILDKCN 435
+RMV EAEKY+ ED+ + IQAKN LESY +S+ ++++D LK+K+ SDK+T+
Sbjct: 514 DRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVK 573
Query: 436 DTIKWLDSNQLADKEEYEHKQKELEA 513
+TI+WLDSN A K+E+E KQKELE+
Sbjct: 574 ETIEWLDSNTTAAKDEFEAKQKELES 599
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 158 bits (383), Expect = 9e-40
Identities = 81/121 (66%), Positives = 93/121 (76%)
Frame = +2
Query: 2 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 181
Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA
Sbjct: 429 YADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSA 488
Query: 182 IEKSTNKENKITITNDKGRLSKEETSVWLMRQRSTETRMTSKRRPSRPRMHWNLTASAYC 361
+EK T K KITITNDKGRLSKEE + M + + + + SR + +L + AY
Sbjct: 489 LEKGTGKTQKITITNDKGRLSKEE--IDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYS 546
Query: 362 L 364
L
Sbjct: 547 L 547
Score = 99.1 bits (236), Expect = 6e-22
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +1
Query: 256 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSILSTMEDXKLKEKISDSDKQTILDKCN 435
+RMV+EAEKY+ ED+ + IQAKN LESY +S+ ++++D LK+K+ SDK+ I
Sbjct: 514 DRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVK 573
Query: 436 DTIKWLDSNQLADKEEYEHKQKELE 510
+TI+WLD N A K+EYE KQKELE
Sbjct: 574 ETIEWLDHNTTAAKDEYEDKQKELE 598
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 128 bits (310), Expect = 6e-31
Identities = 60/83 (72%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 DNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIE 187
DNQ VLIQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++
Sbjct: 460 DNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVD 519
Query: 188 KS-TNKENKITITNDKGRLSKEE 253
KS K K+ I NDKGRLS+E+
Sbjct: 520 KSGKGKPEKLVIKNDKGRLSEED 542
Score = 72.9 bits (171), Expect = 4e-14
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +1
Query: 256 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSILSTM-EDXKLKEKISDSDKQTILDKC 432
ERMV EAE++ ED KE I+A+N LE+Y +S+ +D +L K+ DKQ +LD
Sbjct: 544 ERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAV 603
Query: 433 NDTIKWLD-SNQLADKEEYEHKQKELEA 513
D +WL+ + A KEE+E ++++L+A
Sbjct: 604 EDVAEWLEIHGEDASKEEFEDQRQKLDA 631
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 103 bits (248), Expect = 2e-23
Identities = 45/82 (54%), Positives = 62/82 (75%)
Frame = +2
Query: 5 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 184
+D Q V I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA
Sbjct: 473 ADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSAR 532
Query: 185 EKSTNKENKITITNDKGRLSKE 250
+K+TNK++ IT+ G E
Sbjct: 533 DKATNKDSSITVAGSSGLTDSE 554
Score = 39.5 bits (88), Expect = 5e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 256 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSILSTME--DXKLKEKISDSDKQTILDK 429
E MV +AEKYR D +KE I+ N ES C I S ++ KL ++ + + I D
Sbjct: 556 EAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITDL 615
Query: 430 CNDTIKWLDSNQLADKEEYEHKQKELEAFTIR 525
K ++ E+ + K E++ +++
Sbjct: 616 RETVAKVNAGDEGITSEDMKKKIDEIQQLSLK 647
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 92.7 bits (220), Expect = 5e-20
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +2
Query: 5 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 184
+DNQ V V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+
Sbjct: 435 ADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAV 494
Query: 185 EKSTNKENKITITNDKGRLS 244
EK+T + I ITN G LS
Sbjct: 495 EKTTGRSAHIEITNSVGHLS 514
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 37.5 bits (83), Expect = 0.002
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Frame = +1
Query: 253 DERMVNEAEKYRNEDD-KQKETIQAKNALESYCFS-----ILSTMEDXKLKEKISDSD-K 411
D +NE +K+ +E+D T +N S S +L +E + K +D+D K
Sbjct: 220 DSENINEVKKFEDEEDTSTPNTSSFQNNSSSLDLSDNLSYLLQYLEGNRSKINATDADVK 279
Query: 412 QTILDKCNDTIKWLDSNQLADKEEYEHKQK---ELEAFTIR*LRRCTRVPE-ESPE 567
Q + D + KW + ++ +E YE +K EL ++T L T+V + ++P+
Sbjct: 280 QLLSDVKKNKSKWANDQRIGQEELYEAAEKVVLELRSYTEHSLAFLTKVSKRDAPD 335
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 33.9 bits (74), Expect = 0.025
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 6/123 (4%)
Frame = +2
Query: 5 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA- 181
S NQ G L + + + + N G + P VT + D + LN +
Sbjct: 6 SKNQIG-LGRAIQSDFTKNRRNRKGGLKHIVDSDPKAHRAALRSVTHETDLDEFLNTAEL 64
Query: 182 --IEKSTNKENKITITNDKGR---LSKEETSVWLMRQRSTETRMTSKRRPSRPRMHWNLT 346
+E K+N I N + LSKEE + +Q + R+T RRP HW+ T
Sbjct: 65 GEVEFIAEKQNVTVIQNPEQNPFLLSKEEAARSKQKQEKNKDRLTIPRRP-----HWDQT 119
Query: 347 ASA 355
+A
Sbjct: 120 TTA 122
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 29.5 bits (63), Expect = 0.55
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 220 YQRQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSILSTMEDXKLKEKIS 399
+ +Q SSL + N A + + K E + LE Y ++L D K++ K+
Sbjct: 831 FDKQTSSLAQLRYSIQNVAHAQKESEVKYNELNEQVKTLEGYVETVLEKFNDLKIENKVP 890
Query: 400 DS 405
++
Sbjct: 891 ET 892
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 28.7 bits (61), Expect = 0.96
Identities = 10/46 (21%), Positives = 24/46 (52%)
Frame = +1
Query: 160 RYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDERMVNEAEKYRNED 297
+Y ++ R +H E++ + + +G++ER + A+ N+D
Sbjct: 478 KYVRQIESRRIHFSKEEEKREREKSKGYRGQEERFIENADGADNDD 523
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.96
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 385 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 510
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 28.7 bits (61), Expect = 0.96
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 343 YCFSILSTMEDXKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK--EEYEHKQKELEAF 516
Y +L ++ D + KE+ S S ++LD N + N + D+ E +HK +++
Sbjct: 394 YTGIVLPSLFD-RFKERKS-SLVHSLLDAANAIFESCGLNDIMDETLEFLKHKNPQVKTE 451
Query: 517 TIR*LRRCTRVPEESP 564
T+R L RC ++ + P
Sbjct: 452 TLRWLNRCLQLTDVCP 467
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Frame = +1
Query: 265 VNEAEKYRNEDDKQKETIQAKNALESYCFSILSTMEDXKLKEKISDSDKQTILDKC---- 432
+NE + Y + + Q +T + L S C + LS L + D + +L C
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELSGKN--VLFFYFLEDDSEKLLKACQHFI 887
Query: 433 --NDTIKWLDSNQLADK 477
D+IK L N+ DK
Sbjct: 888 CVKDSIKRLGDNKFEDK 904
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 325 KNALESYCFSILSTMEDXKLKEKISDSDKQTILDKCNDTIKW 450
K E YC S++ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.5 bits (58), Expect = 2.2
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Frame = +1
Query: 238 SLQGRDERMVNEA-EKYRNEDDKQ-------KETIQAKNALESYCFSILSTMED--XKLK 387
S+ +++R+ E EKYR + + ET+ KNALE Y + + ++D
Sbjct: 543 SVSVQEDRLPTEVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPFT 602
Query: 388 EKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKEL 507
+ S + +L K D WL + + K Y K ++L
Sbjct: 603 NEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDL 640
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 2.2
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +1
Query: 226 RQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSILSTMEDXKLKE---KI 396
RQ++S+ + N+ E + DDKQ + KN+LE +I MED E K
Sbjct: 1261 RQKTSIVAKYR---NKRELPEDSDDKQDTASKDKNSLE----TIDEKMEDASKIEGDAKT 1313
Query: 397 SDSDKQTILDKCNDTIK 447
D ++ LDK D K
Sbjct: 1314 GDDNEMEDLDKMEDLEK 1330
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 177 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 40
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 122 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEETSVWLMRQRSTETRM 298
+P TF NG++N+S + ++ N E + DKGR + T V ++R++ + +
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIR-ATMVDVLREKFKDYGL 180
Query: 299 T 301
T
Sbjct: 181 T 181
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 3.9
Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 488 STSRKNWRHLQSDNYE-DVP 544
S +R NW H++ +NY D+P
Sbjct: 102 SVNRSNWDHIRQENYSPDIP 121
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 3.9
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 229 QRSSLQGRDERMVNEAEKYR--NEDDKQKETIQAKNALESYCFSILSTMEDXKLKEKISD 402
+R+ +Q R + + N ++ E DK ET+ K A+ S+ +++ +++ K+S
Sbjct: 219 ERNEMQERLDILTNLLDELTLLYETDKFDETM--KEAILSF-----EDLKEQEIRRKVSS 271
Query: 403 SDKQTILDKCNDTIKWL 453
D L+ CN+ + L
Sbjct: 272 DDVHNYLESCNNHLSML 288
>SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +1
Query: 406 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEAFTIR*LRRCTRVPEESPEVCRASR 585
+K L K + WL Q K + QK+LE + +R + + E + S+
Sbjct: 183 NKVQTLGKAKNKKHWLGVYQSFGKASVDQIQKQLECYNVR-MMELNKTDENNESAICESQ 241
Query: 586 AEHPEPE 606
A E E
Sbjct: 242 ASSKEDE 248
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 199 QGEQDHHYQRQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSILSTM 369
+ E H +S + +++ E ++ ED+KQ E + K AL+ +C S+L M
Sbjct: 285 KNEFSSHPAFNATSSETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFC-SLLRNM 340
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 176 SAIEKSTNKEN---KITITNDKGRLSKEETSVWLMRQRSTETRMTSKRRPSRPRMHWNLT 346
SA+EK K K+TIT+D ++S + + V + T + SK S + N
Sbjct: 41 SALEKKNRKSKSKPKVTITSDTPKVSSQHSPVSSAYTGDSTTDLDSKSGHSSSQKLSNKV 100
Query: 347 ASA 355
+SA
Sbjct: 101 SSA 103
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 5.1
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 232 RSSLQGRDERMVNEAEKYRNEDD----KQKETIQAKNALESYCFSILSTMEDXKLKEKIS 399
RS + +E E ++ N DD K++ + A N + Y S LS + +KEK S
Sbjct: 244 RSRARSSNEASYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLS---ESSMKEKQS 300
Query: 400 DSDKQTILDKCNDTIK 447
+K DK + K
Sbjct: 301 KIEKYMKSDKSSKNFK 316
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 553 EESPEVCRASRAEHPEPE 606
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 178 RYREVHQQGEQDHHYQRQRSSLQGRDERMVNEAEKYRNEDDKQKE 312
R+R+ H + QD +R + D+R + YRN+ + +E
Sbjct: 171 RHRDRHHRSNQDRSRERSDNEQHSSDKR-EHSRRSYRNDRNNWRE 214
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 25.8 bits (54), Expect = 6.7
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 373 DXKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEAFTIR*LRRCTRVP 552
D +++ + D ++ L K N+ L+ N A EY + +E EAF IR RR
Sbjct: 29 DEEIESSLKDVRQE--LQKLNEEQSRLEKN--AQIPEY--RVRESEAFLIRMQRRLESAE 82
Query: 553 EESPEVCRAS 582
EE + RAS
Sbjct: 83 EEFEKQRRAS 92
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.8 bits (54), Expect = 6.7
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 268 NEAEKYRNEDDKQKETIQAKNALESYCFSILSTMEDXKLKEKISDSDKQTILDKCNDTIK 447
+E K +D Q+E Q KNA E Y + + M D +L ++ S T+
Sbjct: 864 DEKLKQMAKDIMQEE--QYKNANEQYIYEDMEVMSDFEL-HRLCRS-FPTLQSYTLKDDP 919
Query: 448 WLDSNQLADKEEYEHKQKE 504
W+DS ++ +E K KE
Sbjct: 920 WMDSGKIRVLKELLPKMKE 938
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -2
Query: 192 DFSIAETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPSNTWMSTPGW 13
+ S L IP+AS K S T G G S + P L++ + R+ S +
Sbjct: 479 NLSRRNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERNSFRETESPKPF 538
Query: 12 LS 7
LS
Sbjct: 539 LS 540
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +1
Query: 160 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRD---ERMVNEAEKYRNEDDKQK 309
R P R +YRE H + + H R QGR ++ + +++Y ++ +
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYKKRSHRSDRYTERENPDR 373
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,694,710
Number of Sequences: 5004
Number of extensions: 49343
Number of successful extensions: 250
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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