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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00023
         (608 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi...    57   2e-09
SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces po...    42   9e-05
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac...    42   9e-05
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po...    37   0.002
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po...    31   0.100
SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyc...    28   0.93 
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    28   1.2  
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    27   2.1  
SPAC1399.05c |||transcription factor, zf-fungal binuclear cluste...    27   2.1  
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch...    27   2.8  
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb...    27   2.8  
SPBC30D10.06 |lsm4||U6 snRNP-associated protein Lsm4|Schizosacch...    27   2.8  
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces...    26   5.0  
SPCC1259.06 |||transcription factor TFIID complex subunit 8 |Sch...    25   6.5  
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom...    25   6.5  
SPAC1635.01 |||voltage-dependent anion-selective channel|Schizos...    25   6.5  
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce...    25   8.7  
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2...    25   8.7  
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma...    25   8.7  
SPAC8C9.06c |||mitochondrial translation regulator |Schizosaccha...    25   8.7  
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos...    25   8.7  
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos...    25   8.7  
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc...    25   8.7  

>SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 466

 Score = 56.8 bits (131), Expect = 2e-09
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = +2

Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 466
           + +D+D A ++G+ V N+P AN+ S  EL    ++ LAR V   S  L  G W++     
Sbjct: 131 NQVDLDFAAERGIAVFNSPYANSRSVAELVIGYIISLARQVGDRSLELHRGEWNKVSSGC 190

Query: 467 SELAGKTLAILGLTG-RPRVATRMYAFGMNIIGFD 568
            E+ GKTL I+G      +++    A G++++ +D
Sbjct: 191 WEIRGKTLGIIGYGHIGSQLSVLAEAMGLHVVYYD 225


>SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 332

 Score = 41.5 bits (93), Expect = 9e-05
 Identities = 23/76 (30%), Positives = 40/76 (52%)
 Frame = +2

Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 466
           +N+D+ +A   G+ V+  P  +  +  E T  L+L L R +  A   ++   ++     G
Sbjct: 80  NNVDLKAAADNGITVVRVPAYSPYAVAEYTIGLLLSLNRKIHRAYVRVREDDFNLNGLLG 139

Query: 467 SELAGKTLAILGLTGR 514
            +L GKT+ +LG TGR
Sbjct: 140 HDLHGKTIGLLG-TGR 154


>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 340

 Score = 41.5 bits (93), Expect = 9e-05
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = +2

Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 466
           +N+DVD A + GV V N P         +   L +   R    A  +L+ G+W + L   
Sbjct: 95  NNVDVDWATRNGVYVANTPNGPTEGTANMNLMLFMCTLRGAREAEQSLRLGKWRQNLSLT 154

Query: 467 SELAGKTLAILGL 505
            +  GK + I+G+
Sbjct: 155 DDPYGKRVGIIGM 167


>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 334

 Score = 37.1 bits (82), Expect = 0.002
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
 Frame = +2

Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 466
           + +DV +   +G+ V + P A   +  ++   LML   R        L    W+      
Sbjct: 92  ETVDVAACTARGIQVSHVPKAVDDATADVGIFLMLGALRGFNQGIFELHKNNWNANCKPS 151

Query: 467 SELAGKTLAILGLTGRPR-VATRMYAFGMNII 559
            +  GKTL ILGL G  + +A R  AF M I+
Sbjct: 152 HDPEGKTLGILGLGGIGKTMAKRARAFDMKIV 183


>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 897

 Score = 31.5 bits (68), Expect = 0.100
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = -3

Query: 477 ASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSS-HALSALAPGALITPTPFLPAES 301
           +SSLP   + S  P+ S++   T+  +    +V  SS H +    P  L  P+ F+ A+ 
Sbjct: 116 SSSLPSIPSSSSTPSISSIPHTTSSVSNDIPSVLGSSDHPIDLDNPEHLTPPSSFITAKQ 175

Query: 300 TSMLSTPAP 274
            S L TP P
Sbjct: 176 LSRLPTPLP 184


>SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 435

 Score = 28.3 bits (60), Expect = 0.93
 Identities = 20/96 (20%), Positives = 39/96 (40%)
 Frame = -3

Query: 501 PRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPT 322
           P    +L   S  + ++ S LP F      ++    +N+ +  S    ++L+   L++P 
Sbjct: 159 PSSTDLLSPDSQKLSKSSSDLPQFDYPSLNSSPTFNSNLPISSSRFEKTSLSDSKLVSPE 218

Query: 321 PFLPAESTSMLSTPAPARPTTFTSRLRPTPLWSLEL 214
           P    +    +  P   R    TS  RP P  + ++
Sbjct: 219 PLDDNKDIQFIKKPIYTR----TSEPRPKPAGTFKI 250


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = -3

Query: 411 TTWRARTNINVQVSSHALSALAPGALITPTPFLPAEST---SMLSTPAPARPTTFTSRLR 241
           TT     +     + +  S+L P +  + TP   A ST   S  STP  +  +T T+   
Sbjct: 261 TTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSAS 320

Query: 240 PTPLWSLELLNA 205
            TPL S+   N+
Sbjct: 321 STPLSSVSSANS 332


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 342 GALITP-TPFLPAESTSMLSTPAPARPTTFT 253
           G   TP TP +P  STS  STP P   T+ T
Sbjct: 295 GNSTTPVTPTVPPTSTSSTSTPPPPASTSST 325



 Score = 27.1 bits (57), Expect = 2.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 342 GALITP-TPFLPAESTSMLSTPAPARPTTFT 253
           G   TP TP +P  STS  STP P   T+ T
Sbjct: 349 GNSTTPVTPTVPPTSTSSTSTPPPPASTSST 379



 Score = 26.2 bits (55), Expect = 3.7
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -3

Query: 339 ALITP-TPFLPAESTSMLSTPAPARPTTFT-SRLRPTPLWS 223
           +L TP TP +P  STS  S P P   T+ T +   P P  S
Sbjct: 129 SLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTS 169



 Score = 25.8 bits (54), Expect = 5.0
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -3

Query: 339 ALITP-TPFLPAESTSMLSTPAPARPTTFT-SRLRPTPLWS 223
           +L TP TP +P  STS  S P P   T+ T +   P P  S
Sbjct: 186 SLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTS 226



 Score = 25.8 bits (54), Expect = 5.0
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -3

Query: 339 ALITP-TPFLPAESTSMLSTPAPARPTTFT-SRLRPTPLWS 223
           +L TP TP +P  STS  S P P   T+ T +   P P  S
Sbjct: 242 SLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTS 282


>SPAC1399.05c |||transcription factor, zf-fungal binuclear cluster
           type|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 529

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 419 STALKAGRWDRALYTGSELAGKTLAILGLTGRPRVATRMYAFGMNII 559
           S    A ++   LYT S L   T  ++ L   P +  R+Y   +NI+
Sbjct: 145 SVDYSASQYMELLYTKSHLMLATACLIALRHNPSLKARIYTDVLNIV 191


>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 867

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 462 VYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGA 337
           + R R HL  + A E  T WR    +  +  +  LS L P A
Sbjct: 334 IRRLRGHLREYVAWERNTIWREMMAMERRTQAARLSGLKPVA 375


>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 695

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +2

Query: 392 VLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLTGRPRVATRMYAF 544
           +L    + A T+ K    +   + GS   GK++ ++ L G   V T++Y F
Sbjct: 579 ILIADSIDAFTSSKTAYVNATWFHGSLEKGKSMHVIALFGCHAVLTKLYCF 629


>SPBC30D10.06 |lsm4||U6 snRNP-associated protein
           Lsm4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 121

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 116 QRLRNRHHYQGQDLQGRTSYGDTQPRRSG 202
           QR      ++G+  +GR +YG T P R G
Sbjct: 86  QRENRGSRFRGRGQRGRGNYGHTAPNRRG 114


>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 466

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -3

Query: 372 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFTSRLRPTP 232
           ++ A +A  P A   P P +P  + + ++TP  A P    +   P P
Sbjct: 352 TTEAAAAQYPQAAFPPPPVMPQPAAAAVTTPV-AAPVAAAAAAVPVP 397


>SPCC1259.06 |||transcription factor TFIID complex subunit 8
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 222

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 375 VSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 259
           + S A+S   P  ++   P  PA  T M +   P RPT+
Sbjct: 117 LGSLAVSQNRPAYVVNHLPPFPASHTYMATPVYPVRPTS 155


>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 963

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 411 TTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTP 280
           T +R   ++N+  S +A S  A    ++    +PA STS  S P
Sbjct: 524 TPYRGLHDVNLPASGNASSVSAIPPQVSAQTTIPAASTSATSGP 567


>SPAC1635.01 |||voltage-dependent anion-selective
           channel|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 282

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -3

Query: 525 ATRGRPVKPRMARVLPASSLPVYRARSHLPAFSAVEAG--TTWRARTNIN 382
           AT G    P    +  +++L V+RA  +    S VEAG   TW A +  N
Sbjct: 165 ATIGYLASPLSVALQASNNLSVFRASYYHRVSSDVEAGGNVTWDAASTAN 214


>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 413

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 375 VSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFT 253
           +SS+AL ++ P    TPT  +P    S  +T AP+   + T
Sbjct: 1   MSSYALPSMQP----TPTSSIPLRQMSQPTTSAPSNSASST 37


>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
           Byr2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 659

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 318 FLPAESTSMLSTPAPARPTTFTS 250
           F P  S S +  P+P  PT+ TS
Sbjct: 355 FSPGSSPSFIEQPSPISPTSTTS 377


>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 462

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 363 ALSALAPGALITPTPFLPAESTSMLSTPA 277
           +LS + P +  +P+P   A STS+ S PA
Sbjct: 32  SLSEINPSSFQSPSPSPFASSTSLASKPA 60


>SPAC8C9.06c |||mitochondrial translation regulator
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 931

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 405 WRARTNINVQVSSHALSALAPGALITPTPFL 313
           W+  TN  +QV ++ L  L P   +   PFL
Sbjct: 96  WKTSTNPTLQVRAYMLDLLLPFFTLDLLPFL 126


>SPAC328.04 |||AAA family ATPase, unknown biological
           role|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 741

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -2

Query: 481 ASELAASVQSPVPPA-SLQRSGSWDHVASQNQHQRAGQLA 365
           A + +   +S +PP+ SL R+G    V++QN   RA  LA
Sbjct: 191 AKKASVKSKSVLPPSKSLARTGLPAEVSTQNNANRAALLA 230


>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 855

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
 Frame = -1

Query: 491 RGSCQRARCQCTEPGPTC-----QPSAQWKLGPRGEP 396
           +G     R   T P PTC     + +  W+  P G+P
Sbjct: 618 KGDANTRRANATNPTPTCTNCQTRTTPLWRRSPDGQP 654


>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 781

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 501 PRMARVLPASSLPVYRARSHLPAFSAVE 418
           PR     PA+ +PV  +R H P  S ++
Sbjct: 96  PRQKHTAPATPIPVSASRHHKPHHSGLK 123


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,366,448
Number of Sequences: 5004
Number of extensions: 43616
Number of successful extensions: 179
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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