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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B05
         (998 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    34   0.027
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    32   0.11 
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    31   0.34 
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch...    29   1.0  
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S...    23   1.9  
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe...    27   4.1  
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2...    26   7.2  
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ...    26   9.5  

>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 34.3 bits (75), Expect = 0.027
 Identities = 18/62 (29%), Positives = 19/62 (30%)
 Frame = -1

Query: 671 PPPPXXXXXXXAPXXXXXXXXXGXPPPPPPXXGXGXXFPXGGGXKXXYXPPXXPXPPPPP 492
           PPPP        P           PPPPPP                   P     PPPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRS-------NAAGSIPLPPQGRSAPPPPP 365

Query: 491 PK 486
           P+
Sbjct: 366 PR 367



 Score = 33.5 bits (73), Expect = 0.048
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = -1

Query: 599 PPPPPPXXGXGXXFPXGGGXKXXYXPPXXPXPPPPP 492
           PPPPPP        P G G      PP    PPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPP----PPPPP 343



 Score = 30.7 bits (66), Expect = 0.34
 Identities = 23/86 (26%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
 Frame = -1

Query: 740 PPXXVGGGXXXPPPXXXGXGXXXPPPPXXXXXXXAPXXXXXXXXXGXPPPPPP--XXGXG 567
           PP         PP          PPPP       A            PPPPPP      G
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373

Query: 566 XXFPXGGGXKXXYXPPXXPXPPPPPP 489
              P     +    P   P PPP  P
Sbjct: 374 RQPPPLSSSRAVSNP---PAPPPAIP 396



 Score = 30.3 bits (65), Expect = 0.44
 Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 3/87 (3%)
 Frame = -1

Query: 740 PPXXVGGGXXXPPPXXXGXGXXXPPPPXXXXXXXA--PXXXXXXXXXGXPPPPPPXXG-X 570
           PP     G    PP   G     PPPP          P           P PPP   G  
Sbjct: 342 PPRSNAAGSIPLPPQ--GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRS 399

Query: 569 GXXFPXGGGXKXXYXPPXXPXPPPPPP 489
               P  G       PP  P PP  PP
Sbjct: 400 APALPPLGNASRTSTPP-VPTPPSLPP 425



 Score = 27.5 bits (58), Expect = 3.1
 Identities = 21/90 (23%), Positives = 23/90 (25%), Gaps = 2/90 (2%)
 Frame = +2

Query: 719 PPPXXXGGXPPXXXXVXXXXGGXPXXSPPQKXXXPPPXXXKKKXXXP--PPPSXKKXKXP 892
           PP     G  P            P  S P     PPP    +    P  PPP+      P
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401

Query: 893 LXXXXXXXXXXXXXKXXXPPPLXXXXPPPL 982
                             PP L    PP L
Sbjct: 402 ALPPLGNASRTSTPPVPTPPSLPPSAPPSL 431



 Score = 26.2 bits (55), Expect = 7.2
 Identities = 15/68 (22%), Positives = 18/68 (26%)
 Frame = +2

Query: 683 PXPXXRGGXKXXPPPXXXGGXPPXXXXVXXXXGGXPXXSPPQKXXXPPPXXXKKKXXXPP 862
           P P    G    PP        P            P   PP            KK   PP
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314

Query: 863 PPSXKKXK 886
           PP  ++ +
Sbjct: 315 PPPSRRNR 322



 Score = 25.8 bits (54), Expect = 9.5
 Identities = 22/94 (23%), Positives = 24/94 (25%), Gaps = 1/94 (1%)
 Frame = -1

Query: 764 PXXVGGXXPPXXVGG-GXXXPPPXXXGXGXXXPPPPXXXXXXXAPXXXXXXXXXGXPPPP 588
           P  +    PP  V       PPP           PP       AP            PP 
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292

Query: 587 PPXXGXGXXFPXGGGXKXXYXPPXXPXPPPPPPK 486
           PP              K        P PPPPP +
Sbjct: 293 PPPSSRVSAAALAANKKR-------PPPPPPPSR 319


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
           Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 32.3 bits (70), Expect = 0.11
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -1

Query: 605 GXPPPPPPXXGXGXXFPXGGGXKXXYXPPXXPXPPPPPPKXXKK 474
           G PPPPPP  G              + PP  P PPPPP    K+
Sbjct: 7   GNPPPPPPPPG--------------FEPPSQPPPPPPPGYVKKR 36



 Score = 28.3 bits (60), Expect = 1.8
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 524 PPXXPXPPPPPP 489
           PP  P PPPPPP
Sbjct: 5   PPGNPPPPPPPP 16



 Score = 24.2 bits (50), Expect(2) = 2.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 392 PPXLXPPPXPPP 427
           PP   PPP PPP
Sbjct: 5   PPGNPPPPPPPP 16



 Score = 21.4 bits (43), Expect(2) = 2.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 542 PPPPXGNXPP 571
           PPPP G  PP
Sbjct: 12  PPPPPGFEPP 21


>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1461

 Score = 30.7 bits (66), Expect = 0.34
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 740 PPXXVGGGXXXPPPXXXGXGXXXPPPP 660
           PP  + GG   PPP     G   PPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPP 779



 Score = 30.3 bits (65), Expect = 0.44
 Identities = 21/61 (34%), Positives = 21/61 (34%)
 Frame = -1

Query: 671 PPPPXXXXXXXAPXXXXXXXXXGXPPPPPPXXGXGXXFPXGGGXKXXYXPPXXPXPPPPP 492
           PPPP       AP            PPP P  G     P   G      PP    PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPV-------PPPAPIMGGPPPPPPPPGVAGAGPPP----PPPPP 782

Query: 491 P 489
           P
Sbjct: 783 P 783



 Score = 28.7 bits (61), Expect = 1.4
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = -1

Query: 599 PPPPPPXXGXGXXFPXGGGXKXXYXPPXXPXPPPPPP 489
           PPPPPP        P              P PPPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768



 Score = 27.9 bits (59), Expect = 2.4
 Identities = 16/47 (34%), Positives = 16/47 (34%)
 Frame = -1

Query: 707 PPPXXXGXGXXXPPPPXXXXXXXAPXXXXXXXXXGXPPPPPPXXGXG 567
           PPP     G   PPPP        P           PPPPPP    G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPP----------PPPPPPAVSAG 788



 Score = 26.6 bits (56), Expect = 5.5
 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
 Frame = -1

Query: 764 PXXVGGXXPPXXVGGGX-XXPPPXXXGXGXXXPPPP 660
           P  +    P   +GG     PPP   G G   PPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781



 Score = 26.6 bits (56), Expect = 5.5
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 681 PPPPXXGGGXXXSPPHXXXGXXPPXXP 761
           PP P  GG     PP    G  PP  P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPP 779


>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
           Y|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1002

 Score = 29.1 bits (62), Expect = 1.0
 Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
 Frame = -1

Query: 722 GGXXXPPPXXXGXGXXXPPPP-XXXXXXXAPXXXXXXXXXGXPPPPPPXXGXGXXFPXGG 546
           G    PPP     G   PPPP         P            PPPP     G   P   
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP--- 260

Query: 545 GXKXXYXPPXXPXPPPP 495
                +  P    PPPP
Sbjct: 261 -PPPMHHEPGEHMPPPP 276



 Score = 29.1 bits (62), Expect = 1.0
 Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
 Frame = -1

Query: 722 GGXXXPPPXXXGXGXXXPPPP-XXXXXXXAPXXXXXXXXXGXPPPPPPXXGXGXXFPXGG 546
           G    PPP     G   PPPP         P            PPPP     G   P   
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP--- 325

Query: 545 GXKXXYXPPXXPXPPPP 495
                +  P    PPPP
Sbjct: 326 -PPPMHHEPGEHMPPPP 341


>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
           Cap1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 551

 Score = 23.4 bits (48), Expect(2) = 1.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 512 PXPPPPPP 489
           P PPPPPP
Sbjct: 306 PPPPPPPP 313



 Score = 23.0 bits (47), Expect(2) = 1.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 605 GXPPPPPP 582
           G PPPPPP
Sbjct: 304 GLPPPPPP 311


>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 273

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 492 GGGGGGGXXGGXIXXFXPPPXGEXXPPPXLGGGG 593
           G GGG G  GG +  F   P G    P   GG G
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272


>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 1217

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 524  PPXXPXPPPPPPKXXKK 474
            P   P PPPPPP   +K
Sbjct: 1091 PSAVPPPPPPPPAEVEK 1107


>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1420

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = -1

Query: 671 PPPPXXXXXXXAPXXXXXXXXXGXPPPPPP 582
           PPP        AP           PPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,317,617
Number of Sequences: 5004
Number of extensions: 40382
Number of successful extensions: 329
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 517271174
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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